Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
BRCA2P51587 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BRCA2P51587 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.4■□□□□ 0.38
BRCA2P51587 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.4■□□□□ 0.38
BRCA2P51587 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.4■□□□□ 0.38
BRCA2P51587 FGFR3P1-201ENST00000449999 601 ntBASIC17.4■□□□□ 0.38
BRCA2P51587 BNIP3P13-201ENST00000599968 566 ntBASIC17.4■□□□□ 0.38
BRCA2P51587 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BRCA2P51587 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
BRCA2P51587 FLJ38576-201ENST00000623820 2459 ntBASIC17.4■□□□□ 0.38
BRCA2P51587 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.4■□□□□ 0.38
BRCA2P51587 ALOX12P2-203ENST00000570921 1945 ntBASIC17.4■□□□□ 0.38
BRCA2P51587 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
BRCA2P51587 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.39■□□□□ 0.37
BRCA2P51587 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCA2P51587 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCA2P51587 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCA2P51587 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.39■□□□□ 0.37
BRCA2P51587 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCA2P51587 RNU1-114P-201ENST00000365297 166 ntBASIC17.39■□□□□ 0.37
BRCA2P51587 AC097065.1-201ENST00000425737 517 ntBASIC17.39■□□□□ 0.37
BRCA2P51587 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.39■□□□□ 0.37
BRCA2P51587 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.39■□□□□ 0.37
BRCA2P51587 RPL17P45-201ENST00000586289 509 ntBASIC17.39■□□□□ 0.37
BRCA2P51587 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.39■□□□□ 0.37
BRCA2P51587 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.39■□□□□ 0.37
BRCA2P51587 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.39■□□□□ 0.37
BRCA2P51587 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCA2P51587 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
BRCA2P51587 GGT3P-204ENST00000453783 1664 ntBASIC17.39■□□□□ 0.37
BRCA2P51587 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRCA2P51587 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRCA2P51587 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCA2P51587 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
BRCA2P51587 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCA2P51587 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.39■□□□□ 0.37
BRCA2P51587 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRCA2P51587 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.39■□□□□ 0.37
BRCA2P51587 AC019193.1-201ENST00000506678 823 ntBASIC17.39■□□□□ 0.37
BRCA2P51587 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
BRCA2P51587 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
BRCA2P51587 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.39■□□□□ 0.37
BRCA2P51587 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.39■□□□□ 0.37
BRCA2P51587 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
BRCA2P51587 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BRCA2P51587 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRCA2P51587 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.38■□□□□ 0.37
BRCA2P51587 PGAM1P5-201ENST00000548011 764 ntBASIC17.38■□□□□ 0.37
BRCA2P51587 DNM1P30-201ENST00000563586 452 ntBASIC17.38■□□□□ 0.37
BRCA2P51587 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.38■□□□□ 0.37
BRCA2P51587 AC091544.8-201ENST00000619490 361 ntBASIC17.38■□□□□ 0.37
BRCA2P51587 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
BRCA2P51587 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
BRCA2P51587 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.38■□□□□ 0.37
BRCA2P51587 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
BRCA2P51587 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 AC009090.5-201ENST00000624886 2285 ntBASIC17.38■□□□□ 0.37
BRCA2P51587 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
BRCA2P51587 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.38■□□□□ 0.37
BRCA2P51587 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.38■□□□□ 0.37
BRCA2P51587 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.38■□□□□ 0.37
BRCA2P51587 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 AC138894.2-201ENST00000602838 371 ntBASIC17.38■□□□□ 0.37
BRCA2P51587 AC007663.3-201ENST00000609632 465 ntBASIC17.38■□□□□ 0.37
BRCA2P51587 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.38■□□□□ 0.37
BRCA2P51587 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
BRCA2P51587 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.38■□□□□ 0.37
BRCA2P51587 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.38■□□□□ 0.37
BRCA2P51587 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
BRCA2P51587 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
BRCA2P51587 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 AC100757.4-201ENST00000626934 759 ntBASIC17.38■□□□□ 0.37
BRCA2P51587 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.38■□□□□ 0.37
BRCA2P51587 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
BRCA2P51587 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.38■□□□□ 0.37
BRCA2P51587 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCA2P51587 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
BRCA2P51587 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BRCA2P51587 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRCA2P51587 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.37■□□□□ 0.37
BRCA2P51587 IGLV3-15-201ENST00000518356 244 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms