Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RFX5P48382 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RFX5P48382 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX5P48382 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.31■□□□□ 0.68
RFX5P48382 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX5P48382 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX5P48382 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.31■□□□□ 0.68
RFX5P48382 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
RFX5P48382 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX5P48382 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX5P48382 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.31■□□□□ 0.68
RFX5P48382 KRT17P7-201ENST00000451704 1104 ntBASIC19.31■□□□□ 0.68
RFX5P48382 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.31■□□□□ 0.68
RFX5P48382 AC010319.3-201ENST00000597028 470 ntBASIC19.31■□□□□ 0.68
RFX5P48382 AC133539.2-201ENST00000604757 467 ntBASIC19.31■□□□□ 0.68
RFX5P48382 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
RFX5P48382 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.31■□□□□ 0.68
RFX5P48382 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.31■□□□□ 0.68
RFX5P48382 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX5P48382 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX5P48382 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RFX5P48382 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX5P48382 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.3■□□□□ 0.68
RFX5P48382 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.3■□□□□ 0.68
RFX5P48382 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RFX5P48382 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX5P48382 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX5P48382 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.3■□□□□ 0.68
RFX5P48382 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.3■□□□□ 0.68
RFX5P48382 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.3■□□□□ 0.68
RFX5P48382 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.3■□□□□ 0.68
RFX5P48382 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 AC025181.2-201ENST00000606994 802 ntBASIC19.3■□□□□ 0.68
RFX5P48382 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.3■□□□□ 0.68
RFX5P48382 AC107373.2-201ENST00000607735 490 ntBASIC19.3■□□□□ 0.68
RFX5P48382 AC005252.2-201ENST00000624630 1141 ntBASIC19.3■□□□□ 0.68
RFX5P48382 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.3■□□□□ 0.68
RFX5P48382 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX5P48382 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.3■□□□□ 0.68
RFX5P48382 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RFX5P48382 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX5P48382 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX5P48382 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX5P48382 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX5P48382 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.29■□□□□ 0.68
RFX5P48382 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.29■□□□□ 0.68
RFX5P48382 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX5P48382 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RFX5P48382 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX5P48382 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX5P48382 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX5P48382 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.29■□□□□ 0.68
RFX5P48382 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.29■□□□□ 0.68
RFX5P48382 AC084364.1-201ENST00000551967 1556 ntBASIC19.29■□□□□ 0.68
RFX5P48382 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX5P48382 PRAL-201ENST00000624952 3286 ntBASIC19.29■□□□□ 0.68
RFX5P48382 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX5P48382 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RFX5P48382 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX5P48382 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RFX5P48382 C1QBPP1-201ENST00000400117 770 ntBASIC19.29■□□□□ 0.68
RFX5P48382 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.29■□□□□ 0.68
RFX5P48382 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.29■□□□□ 0.68
RFX5P48382 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.29■□□□□ 0.68
RFX5P48382 USP32P1-208ENST00000506594 1164 ntBASIC19.29■□□□□ 0.68
RFX5P48382 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.29■□□□□ 0.68
RFX5P48382 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RFX5P48382 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RFX5P48382 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RFX5P48382 AC008735.3-201ENST00000596646 500 ntBASIC19.29■□□□□ 0.68
RFX5P48382 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.29■□□□□ 0.68
RFX5P48382 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX5P48382 CU634019.7-201ENST00000624153 1185 ntBASIC19.29■□□□□ 0.68
RFX5P48382 FP236241.2-201ENST00000624906 1185 ntBASIC19.29■□□□□ 0.68
RFX5P48382 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX5P48382 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RFX5P48382 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RFX5P48382 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX5P48382 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX5P48382 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RFX5P48382 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.29■□□□□ 0.68
RFX5P48382 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms