Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CEACAM3P40198 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CEACAM3P40198 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CEACAM3P40198 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 AC011477.6-201ENST00000604980 1927 ntBASIC13.03□□□□□ -0.32
CEACAM3P40198 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.03□□□□□ -0.32
CEACAM3P40198 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
CEACAM3P40198 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.03□□□□□ -0.32
CEACAM3P40198 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.03□□□□□ -0.32
CEACAM3P40198 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.03□□□□□ -0.32
CEACAM3P40198 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.03□□□□□ -0.32
CEACAM3P40198 AC092183.1-201ENST00000469884 875 ntBASIC13.03□□□□□ -0.32
CEACAM3P40198 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.03□□□□□ -0.32
CEACAM3P40198 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.03□□□□□ -0.32
CEACAM3P40198 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.03□□□□□ -0.32
CEACAM3P40198 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.03□□□□□ -0.32
CEACAM3P40198 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 AL589739.1-201ENST00000607720 493 ntBASIC13.03□□□□□ -0.32
CEACAM3P40198 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.03□□□□□ -0.32
CEACAM3P40198 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CEACAM3P40198 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.03□□□□□ -0.32
CEACAM3P40198 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.03□□□□□ -0.32
CEACAM3P40198 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CEACAM3P40198 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.03□□□□□ -0.32
CEACAM3P40198 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.03□□□□□ -0.32
CEACAM3P40198 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 CYP4F24P-201ENST00000586049 1580 ntBASIC13.03□□□□□ -0.32
CEACAM3P40198 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CEACAM3P40198 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.03□□□□□ -0.32
CEACAM3P40198 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.02□□□□□ -0.32
CEACAM3P40198 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.02□□□□□ -0.32
CEACAM3P40198 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CEACAM3P40198 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CEACAM3P40198 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CEACAM3P40198 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CEACAM3P40198 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
CEACAM3P40198 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
CEACAM3P40198 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CEACAM3P40198 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CEACAM3P40198 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CEACAM3P40198 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CEACAM3P40198 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.02□□□□□ -0.32
CEACAM3P40198 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CEACAM3P40198 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CEACAM3P40198 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.02□□□□□ -0.33
CEACAM3P40198 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
CEACAM3P40198 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.02□□□□□ -0.33
CEACAM3P40198 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.02□□□□□ -0.33
CEACAM3P40198 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CEACAM3P40198 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.02□□□□□ -0.33
CEACAM3P40198 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.02□□□□□ -0.33
CEACAM3P40198 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.02□□□□□ -0.33
CEACAM3P40198 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.02□□□□□ -0.33
CEACAM3P40198 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CEACAM3P40198 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.02□□□□□ -0.33
CEACAM3P40198 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms