Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.63□□□□□ -0.07
SHC1P29353 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.63□□□□□ -0.07
SHC1P29353 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
SHC1P29353 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SHC1P29353 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SHC1P29353 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.63□□□□□ -0.07
SHC1P29353 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.63□□□□□ -0.07
SHC1P29353 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
SHC1P29353 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.63□□□□□ -0.07
SHC1P29353 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.63□□□□□ -0.07
SHC1P29353 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SHC1P29353 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
SHC1P29353 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.63□□□□□ -0.07
SHC1P29353 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.63□□□□□ -0.07
SHC1P29353 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.63□□□□□ -0.07
SHC1P29353 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.63□□□□□ -0.07
SHC1P29353 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.63□□□□□ -0.07
SHC1P29353 AC004449.1-201ENST00000564240 433 ntBASIC14.63□□□□□ -0.07
SHC1P29353 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.63□□□□□ -0.07
SHC1P29353 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
SHC1P29353 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.63□□□□□ -0.07
SHC1P29353 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.63□□□□□ -0.07
SHC1P29353 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.63□□□□□ -0.07
SHC1P29353 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SHC1P29353 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 LINC02447-202ENST00000501888 2146 ntBASIC14.63□□□□□ -0.07
SHC1P29353 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SHC1P29353 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.63□□□□□ -0.07
SHC1P29353 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHC1P29353 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
SHC1P29353 AC099063.4-201ENST00000641099 1602 ntBASIC14.63□□□□□ -0.07
SHC1P29353 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 PPT1-215ENST00000641471 2368 ntBASIC14.62□□□□□ -0.07
SHC1P29353 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
SHC1P29353 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.62□□□□□ -0.07
SHC1P29353 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.62□□□□□ -0.07
SHC1P29353 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SHC1P29353 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.62□□□□□ -0.07
SHC1P29353 MIR4453-201ENST00000584019 89 ntBASIC14.62□□□□□ -0.07
SHC1P29353 MIR4321-201ENST00000592276 80 ntBASIC14.62□□□□□ -0.07
SHC1P29353 AC018529.1-201ENST00000613063 361 ntBASIC14.62□□□□□ -0.07
SHC1P29353 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.62□□□□□ -0.07
SHC1P29353 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.62□□□□□ -0.07
SHC1P29353 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SHC1P29353 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.62□□□□□ -0.07
SHC1P29353 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SHC1P29353 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SHC1P29353 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SHC1P29353 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
SHC1P29353 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.61□□□□□ -0.07
SHC1P29353 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SHC1P29353 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
SHC1P29353 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SHC1P29353 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms