Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.1■□□□□ 0.17
CCND1P24385 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.1■□□□□ 0.17
CCND1P24385 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCND1P24385 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.1■□□□□ 0.17
CCND1P24385 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCND1P24385 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.1■□□□□ 0.17
CCND1P24385 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.1■□□□□ 0.17
CCND1P24385 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.1■□□□□ 0.17
CCND1P24385 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.1■□□□□ 0.17
CCND1P24385 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.1■□□□□ 0.17
CCND1P24385 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.1■□□□□ 0.17
CCND1P24385 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CCND1P24385 AL009183.1-201ENST00000603760 355 ntBASIC16.1■□□□□ 0.17
CCND1P24385 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.1■□□□□ 0.17
CCND1P24385 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CCND1P24385 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.1■□□□□ 0.17
CCND1P24385 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CCND1P24385 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.1■□□□□ 0.17
CCND1P24385 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CCND1P24385 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCND1P24385 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.09■□□□□ 0.17
CCND1P24385 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.09■□□□□ 0.17
CCND1P24385 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCND1P24385 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
CCND1P24385 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 LINC01144-201ENST00000626198 1710 ntBASIC16.09■□□□□ 0.17
CCND1P24385 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.09■□□□□ 0.17
CCND1P24385 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.09■□□□□ 0.17
CCND1P24385 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.09■□□□□ 0.17
CCND1P24385 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
CCND1P24385 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.09■□□□□ 0.17
CCND1P24385 AC074386.1-202ENST00000463561 864 ntBASIC16.09■□□□□ 0.17
CCND1P24385 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.09■□□□□ 0.17
CCND1P24385 AC040169.1-201ENST00000565382 521 ntBASIC16.09■□□□□ 0.17
CCND1P24385 AC068137.2-201ENST00000605408 478 ntBASIC16.09■□□□□ 0.17
CCND1P24385 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.09■□□□□ 0.17
CCND1P24385 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
CCND1P24385 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCND1P24385 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.09■□□□□ 0.17
CCND1P24385 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CCND1P24385 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCND1P24385 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.09■□□□□ 0.17
CCND1P24385 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.09■□□□□ 0.17
CCND1P24385 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 AC232323.1-201ENST00000540724 2099 ntBASIC16.09■□□□□ 0.17
CCND1P24385 REXO1L5P-201ENST00000622260 2098 ntBASIC16.09■□□□□ 0.17
CCND1P24385 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
CCND1P24385 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCND1P24385 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCND1P24385 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
CCND1P24385 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CCND1P24385 FLJ16779-201ENST00000612722 7638 ntBASIC16.08■□□□□ 0.17
CCND1P24385 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCND1P24385 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.08■□□□□ 0.17
CCND1P24385 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
CCND1P24385 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCND1P24385 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCND1P24385 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCND1P24385 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCND1P24385 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.08■□□□□ 0.17
CCND1P24385 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCND1P24385 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.08■□□□□ 0.16
CCND1P24385 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCND1P24385 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms