Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN1P18031 TPRX2P-201ENST00000535362 881 ntBASIC16.81■□□□□ 0.28
PTPN1P18031 AC190387.1-201ENST00000551683 408 ntBASIC16.81■□□□□ 0.28
PTPN1P18031 AC023310.3-201ENST00000557027 670 ntBASIC16.81■□□□□ 0.28
PTPN1P18031 AC100756.1-201ENST00000562736 682 ntBASIC16.81■□□□□ 0.28
PTPN1P18031 AC138749.3-201ENST00000567691 622 ntBASIC16.81■□□□□ 0.28
PTPN1P18031 AC116165.1-201ENST00000611806 668 ntBASIC16.81■□□□□ 0.28
PTPN1P18031 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PTPN1P18031 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PTPN1P18031 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN1P18031 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN1P18031 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN1P18031 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.81■□□□□ 0.28
PTPN1P18031 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN1P18031 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.81■□□□□ 0.28
PTPN1P18031 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTPN1P18031 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PTPN1P18031 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN1P18031 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN1P18031 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTPN1P18031 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.8■□□□□ 0.28
PTPN1P18031 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
PTPN1P18031 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PTPN1P18031 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PTPN1P18031 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PTPN1P18031 DFFBP1-201ENST00000433250 979 ntBASIC16.8■□□□□ 0.28
PTPN1P18031 AL353779.1-201ENST00000434793 351 ntBASIC16.8■□□□□ 0.28
PTPN1P18031 CRB3P1-201ENST00000449338 276 ntBASIC16.8■□□□□ 0.28
PTPN1P18031 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN1P18031 AC093004.1-201ENST00000508850 424 ntBASIC16.8■□□□□ 0.28
PTPN1P18031 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN1P18031 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PTPN1P18031 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN1P18031 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
PTPN1P18031 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN1P18031 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.8■□□□□ 0.28
PTPN1P18031 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN1P18031 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.8■□□□□ 0.28
PTPN1P18031 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PTPN1P18031 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.8■□□□□ 0.28
PTPN1P18031 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTPN1P18031 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
PTPN1P18031 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PTPN1P18031 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN1P18031 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTPN1P18031 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.79■□□□□ 0.28
PTPN1P18031 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PTPN1P18031 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PTPN1P18031 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.79■□□□□ 0.28
PTPN1P18031 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN1P18031 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN1P18031 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN1P18031 API5-211ENST00000534695 560 ntTSL 5 BASIC16.79■□□□□ 0.28
PTPN1P18031 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN1P18031 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.79■□□□□ 0.28
PTPN1P18031 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
PTPN1P18031 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN1P18031 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PTPN1P18031 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PTPN1P18031 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.79■□□□□ 0.28
PTPN1P18031 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms