Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RARBP10826 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.72■□□□□ 0.43
RARBP10826 AC026954.1-201ENST00000429771 1293 ntBASIC17.72■□□□□ 0.43
RARBP10826 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.72■□□□□ 0.43
RARBP10826 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.72■□□□□ 0.43
RARBP10826 RPL13AP20-201ENST00000459725 609 ntBASIC17.72■□□□□ 0.43
RARBP10826 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.72■□□□□ 0.43
RARBP10826 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.72■□□□□ 0.43
RARBP10826 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 RN7SL560P-201ENST00000577943 264 ntBASIC17.72■□□□□ 0.43
RARBP10826 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.72■□□□□ 0.43
RARBP10826 MIR3615-201ENST00000581999 87 ntBASIC17.72■□□□□ 0.43
RARBP10826 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.72■□□□□ 0.43
RARBP10826 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 UBALD1-205ENST00000590891 2641 ntBASIC17.72■□□□□ 0.43
RARBP10826 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RARBP10826 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.72■□□□□ 0.43
RARBP10826 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
RARBP10826 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RARBP10826 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RARBP10826 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARBP10826 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARBP10826 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARBP10826 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARBP10826 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARBP10826 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.71■□□□□ 0.43
RARBP10826 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.71■□□□□ 0.43
RARBP10826 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARBP10826 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RARBP10826 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RARBP10826 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARBP10826 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.71■□□□□ 0.43
RARBP10826 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RARBP10826 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.71■□□□□ 0.43
RARBP10826 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RARBP10826 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.71■□□□□ 0.43
RARBP10826 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.71■□□□□ 0.43
RARBP10826 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
RARBP10826 MIR1247-201ENST00000408206 136 ntBASIC17.71■□□□□ 0.43
RARBP10826 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.71■□□□□ 0.43
RARBP10826 GPAA1P2-201ENST00000417923 928 ntBASIC17.71■□□□□ 0.43
RARBP10826 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RARBP10826 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.71■□□□□ 0.43
RARBP10826 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.71■□□□□ 0.43
RARBP10826 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.71■□□□□ 0.43
RARBP10826 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.71■□□□□ 0.43
RARBP10826 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.71■□□□□ 0.43
RARBP10826 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.71■□□□□ 0.43
RARBP10826 AC091271.1-201ENST00000611877 1162 ntBASIC17.71■□□□□ 0.43
RARBP10826 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.71■□□□□ 0.43
RARBP10826 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.71■□□□□ 0.43
RARBP10826 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
RARBP10826 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RARBP10826 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
RARBP10826 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
RARBP10826 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RARBP10826 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
RARBP10826 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RARBP10826 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RARBP10826 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.7■□□□□ 0.42
RARBP10826 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.7■□□□□ 0.42
RARBP10826 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RARBP10826 AP001282.1-201ENST00000531301 1499 ntBASIC17.7■□□□□ 0.42
RARBP10826 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.7■□□□□ 0.42
RARBP10826 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.7■□□□□ 0.42
RARBP10826 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.7■□□□□ 0.42
RARBP10826 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.7■□□□□ 0.42
RARBP10826 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.7■□□□□ 0.42
RARBP10826 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 DUX4L45-201ENST00000566406 1057 ntBASIC17.7■□□□□ 0.42
RARBP10826 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.7■□□□□ 0.42
RARBP10826 AL139099.5-201ENST00000635274 300 ntBASIC17.7■□□□□ 0.42
RARBP10826 AC008687.7-202ENST00000637404 953 ntBASIC17.7■□□□□ 0.42
RARBP10826 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.7■□□□□ 0.42
RARBP10826 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.7■□□□□ 0.42
RARBP10826 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.7■□□□□ 0.42
RARBP10826 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RARBP10826 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RARBP10826 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.7■□□□□ 0.42
RARBP10826 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms