Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL5A2P05997 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL5A2P05997 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL5A2P05997 FTLP1-201ENST00000449155 526 ntBASIC20.47■□□□□ 0.87
COL5A2P05997 SUPT4H1P2-201ENST00000501248 353 ntBASIC20.47■□□□□ 0.87
COL5A2P05997 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.47■□□□□ 0.87
COL5A2P05997 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC20.47■□□□□ 0.87
COL5A2P05997 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
COL5A2P05997 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC20.47■□□□□ 0.87
COL5A2P05997 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL5A2P05997 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.47■□□□□ 0.87
COL5A2P05997 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL5A2P05997 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.47■□□□□ 0.87
COL5A2P05997 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL5A2P05997 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL5A2P05997 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL5A2P05997 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
COL5A2P05997 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.46■□□□□ 0.87
COL5A2P05997 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.46■□□□□ 0.87
COL5A2P05997 RPS15-201ENST00000233609 534 ntTSL 2 BASIC20.46■□□□□ 0.87
COL5A2P05997 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC20.46■□□□□ 0.87
COL5A2P05997 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC20.46■□□□□ 0.87
COL5A2P05997 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 RPL17P11-201ENST00000417593 544 ntBASIC20.46■□□□□ 0.87
COL5A2P05997 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC20.46■□□□□ 0.87
COL5A2P05997 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COL5A2P05997 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC20.46■□□□□ 0.87
COL5A2P05997 CFL1-214ENST00000534769 758 ntTSL 2 BASIC20.46■□□□□ 0.87
COL5A2P05997 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 RPS15-205ENST00000586686 562 ntTSL 5 BASIC20.46■□□□□ 0.87
COL5A2P05997 RPS15-208ENST00000591804 711 ntTSL 5 BASIC20.46■□□□□ 0.87
COL5A2P05997 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC20.46■□□□□ 0.87
COL5A2P05997 AC026740.1-201ENST00000607068 791 ntBASIC20.46■□□□□ 0.87
COL5A2P05997 AP000346.4-201ENST00000614827 381 ntBASIC20.46■□□□□ 0.87
COL5A2P05997 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
COL5A2P05997 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COL5A2P05997 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC20.46■□□□□ 0.87
COL5A2P05997 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
COL5A2P05997 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.46■□□□□ 0.87
COL5A2P05997 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
COL5A2P05997 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL5A2P05997 AL158070.2-201ENST00000623713 1621 ntBASIC20.46■□□□□ 0.87
COL5A2P05997 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 LSM5-207ENST00000410044 687 ntTSL 3 BASIC20.45■□□□□ 0.86
COL5A2P05997 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC20.45■□□□□ 0.86
COL5A2P05997 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.45■□□□□ 0.86
COL5A2P05997 MSRA-203ENST00000441698 788 ntTSL 2 BASIC20.45■□□□□ 0.86
COL5A2P05997 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC20.45■□□□□ 0.86
COL5A2P05997 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC20.45■□□□□ 0.86
COL5A2P05997 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC20.45■□□□□ 0.86
COL5A2P05997 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC20.45■□□□□ 0.86
COL5A2P05997 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.45■□□□□ 0.86
COL5A2P05997 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
COL5A2P05997 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL5A2P05997 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
COL5A2P05997 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 PARVG-202ENST00000415224 999 ntTSL 2 BASIC20.44■□□□□ 0.86
COL5A2P05997 EEF1DP6-201ENST00000449232 372 ntBASIC20.44■□□□□ 0.86
COL5A2P05997 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC20.44■□□□□ 0.86
COL5A2P05997 AC100850.1-201ENST00000506768 649 ntBASIC20.44■□□□□ 0.86
COL5A2P05997 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC20.44■□□□□ 0.86
COL5A2P05997 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC20.44■□□□□ 0.86
COL5A2P05997 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC20.44■□□□□ 0.86
COL5A2P05997 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC20.44■□□□□ 0.86
COL5A2P05997 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL5A2P05997 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms