Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
POLR3DP05423 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
POLR3DP05423 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
POLR3DP05423 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19■□□□□ 0.63
POLR3DP05423 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19■□□□□ 0.63
POLR3DP05423 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
POLR3DP05423 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19■□□□□ 0.63
POLR3DP05423 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19■□□□□ 0.63
POLR3DP05423 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
POLR3DP05423 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19■□□□□ 0.63
POLR3DP05423 AL596325.1-201ENST00000563991 1082 ntBASIC19■□□□□ 0.63
POLR3DP05423 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19■□□□□ 0.63
POLR3DP05423 AC140912.1-201ENST00000577171 1054 ntBASIC19■□□□□ 0.63
POLR3DP05423 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19■□□□□ 0.63
POLR3DP05423 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19■□□□□ 0.63
POLR3DP05423 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
POLR3DP05423 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19■□□□□ 0.63
POLR3DP05423 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19■□□□□ 0.63
POLR3DP05423 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3DP05423 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 AC024909.3-201ENST00000611513 2257 ntBASIC18.99■□□□□ 0.63
POLR3DP05423 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.99■□□□□ 0.63
POLR3DP05423 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 AC134407.2-201ENST00000625089 1978 ntBASIC18.99■□□□□ 0.63
POLR3DP05423 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.99■□□□□ 0.63
POLR3DP05423 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
POLR3DP05423 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 AP001282.1-201ENST00000531301 1499 ntBASIC18.99■□□□□ 0.63
POLR3DP05423 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 AL391825.1-201ENST00000457671 1364 ntBASIC18.99■□□□□ 0.63
POLR3DP05423 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
POLR3DP05423 EEF1DP4-201ENST00000446006 880 ntBASIC18.99■□□□□ 0.63
POLR3DP05423 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.99■□□□□ 0.63
POLR3DP05423 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
POLR3DP05423 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.99■□□□□ 0.63
POLR3DP05423 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.99■□□□□ 0.63
POLR3DP05423 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.99■□□□□ 0.63
POLR3DP05423 CHCHD2P3-201ENST00000603038 451 ntBASIC18.99■□□□□ 0.63
POLR3DP05423 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
POLR3DP05423 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.99■□□□□ 0.63
POLR3DP05423 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.99■□□□□ 0.63
POLR3DP05423 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.99■□□□□ 0.63
POLR3DP05423 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.99■□□□□ 0.63
POLR3DP05423 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
POLR3DP05423 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
POLR3DP05423 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3DP05423 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3DP05423 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3DP05423 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3DP05423 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
POLR3DP05423 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
POLR3DP05423 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3DP05423 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3DP05423 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3DP05423 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3DP05423 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3DP05423 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3DP05423 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.98■□□□□ 0.63
POLR3DP05423 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3DP05423 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3DP05423 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3DP05423 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3DP05423 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.98■□□□□ 0.63
POLR3DP05423 AC023310.3-201ENST00000557027 670 ntBASIC18.98■□□□□ 0.63
POLR3DP05423 AC100756.1-201ENST00000562736 682 ntBASIC18.98■□□□□ 0.63
POLR3DP05423 AC138749.3-201ENST00000567691 622 ntBASIC18.98■□□□□ 0.63
POLR3DP05423 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.98■□□□□ 0.63
POLR3DP05423 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.98■□□□□ 0.63
POLR3DP05423 AC116165.1-201ENST00000611806 668 ntBASIC18.98■□□□□ 0.63
POLR3DP05423 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
POLR3DP05423 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
POLR3DP05423 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
POLR3DP05423 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms