Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 AC092127.1-201ENST00000567093 3455 ntBASIC12.04□□□□□ -0.48
HLA-DQA1P01909 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 MIR4492-201ENST00000581627 80 ntBASIC12.04□□□□□ -0.48
HLA-DQA1P01909 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HLA-DQA1P01909 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.03□□□□□ -0.48
HLA-DQA1P01909 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 AL645929.1-201ENST00000420084 975 ntBASIC12.03□□□□□ -0.48
HLA-DQA1P01909 HLA-F-220ENST00000434407 884 ntBASIC12.03□□□□□ -0.48
HLA-DQA1P01909 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 TERC-201ENST00000602385 541 ntBASIC12.03□□□□□ -0.48
HLA-DQA1P01909 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 AC083849.1-201ENST00000615227 514 ntBASIC12.03□□□□□ -0.48
HLA-DQA1P01909 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 AC136759.1-202ENST00000530858 2194 ntBASIC12.03□□□□□ -0.48
HLA-DQA1P01909 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.03□□□□□ -0.48
HLA-DQA1P01909 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 AC011477.6-201ENST00000604980 1927 ntBASIC12.03□□□□□ -0.48
HLA-DQA1P01909 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 SLC22A20-204ENST00000530038 1673 ntBASIC12.03□□□□□ -0.48
HLA-DQA1P01909 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.03□□□□□ -0.48
HLA-DQA1P01909 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms