Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.37□□□□□ -0.27
SIX6O95475 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.37□□□□□ -0.27
SIX6O95475 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SIX6O95475 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
SIX6O95475 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 MMP23A-201ENST00000234610 1017 ntBASIC13.37□□□□□ -0.27
SIX6O95475 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 GCSHP5-201ENST00000443090 522 ntBASIC13.37□□□□□ -0.27
SIX6O95475 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.37□□□□□ -0.27
SIX6O95475 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.37□□□□□ -0.27
SIX6O95475 AC091607.1-201ENST00000490318 1060 ntBASIC13.37□□□□□ -0.27
SIX6O95475 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.37□□□□□ -0.27
SIX6O95475 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.37□□□□□ -0.27
SIX6O95475 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
SIX6O95475 AC091167.2-201ENST00000579581 588 ntBASIC13.37□□□□□ -0.27
SIX6O95475 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 AL353135.1-201ENST00000606729 504 ntBASIC13.37□□□□□ -0.27
SIX6O95475 IGHV3-41-201ENST00000613121 348 ntBASIC13.37□□□□□ -0.27
SIX6O95475 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.37□□□□□ -0.27
SIX6O95475 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.37□□□□□ -0.27
SIX6O95475 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SIX6O95475 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SIX6O95475 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 U82695.1-201ENST00000635752 1889 ntBASIC13.37□□□□□ -0.27
SIX6O95475 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.37□□□□□ -0.27
SIX6O95475 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.37□□□□□ -0.27
SIX6O95475 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.37□□□□□ -0.27
SIX6O95475 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.37□□□□□ -0.27
SIX6O95475 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SIX6O95475 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SIX6O95475 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.37□□□□□ -0.27
SIX6O95475 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SIX6O95475 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.36□□□□□ -0.27
SIX6O95475 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.36□□□□□ -0.27
SIX6O95475 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.36□□□□□ -0.27
SIX6O95475 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
SIX6O95475 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.36□□□□□ -0.27
SIX6O95475 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
SIX6O95475 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 LINC01568-207ENST00000641790 1380 ntBASIC13.36□□□□□ -0.27
SIX6O95475 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.36□□□□□ -0.27
SIX6O95475 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.36□□□□□ -0.27
SIX6O95475 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SIX6O95475 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 KRT18P38-201ENST00000449496 1282 ntBASIC13.36□□□□□ -0.27
SIX6O95475 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.36□□□□□ -0.27
SIX6O95475 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.36□□□□□ -0.27
SIX6O95475 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.36□□□□□ -0.27
SIX6O95475 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.36□□□□□ -0.27
SIX6O95475 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.36□□□□□ -0.27
SIX6O95475 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 REXO1L3P-201ENST00000622202 1288 ntBASIC13.36□□□□□ -0.27
SIX6O95475 DGCR9-201ENST00000609630 2415 ntBASIC13.36□□□□□ -0.27
SIX6O95475 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 AC011477.6-201ENST00000604980 1927 ntBASIC13.36□□□□□ -0.27
SIX6O95475 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.36□□□□□ -0.27
SIX6O95475 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SIX6O95475 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SIX6O95475 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SIX6O95475 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.36□□□□□ -0.27
SIX6O95475 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.36□□□□□ -0.27
SIX6O95475 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms