Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLPXO76031 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLPXO76031 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.53□□□□□ -0.08
CLPXO76031 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CLPXO76031 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.53□□□□□ -0.08
CLPXO76031 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 AL122018.1-201ENST00000446607 2310 ntBASIC14.53□□□□□ -0.08
CLPXO76031 AC136759.1-202ENST00000530858 2194 ntBASIC14.53□□□□□ -0.08
CLPXO76031 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CLPXO76031 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
CLPXO76031 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
CLPXO76031 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.53□□□□□ -0.08
CLPXO76031 GPAA1P2-202ENST00000606848 1787 ntBASIC14.53□□□□□ -0.08
CLPXO76031 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.53□□□□□ -0.08
CLPXO76031 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.53□□□□□ -0.08
CLPXO76031 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
CLPXO76031 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CLPXO76031 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.53□□□□□ -0.08
CLPXO76031 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.53□□□□□ -0.08
CLPXO76031 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.53□□□□□ -0.08
CLPXO76031 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.53□□□□□ -0.08
CLPXO76031 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CLPXO76031 AP002414.1-201ENST00000391405 1147 ntBASIC14.53□□□□□ -0.08
CLPXO76031 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 FAM220CP-201ENST00000395253 831 ntBASIC14.53□□□□□ -0.08
CLPXO76031 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CLPXO76031 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CLPXO76031 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.53□□□□□ -0.08
CLPXO76031 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 AL160237.2-201ENST00000556165 472 ntBASIC14.53□□□□□ -0.08
CLPXO76031 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.53□□□□□ -0.08
CLPXO76031 AL732292.2-201ENST00000609649 430 ntBASIC14.53□□□□□ -0.08
CLPXO76031 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CLPXO76031 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLPXO76031 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLPXO76031 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.53□□□□□ -0.08
CLPXO76031 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CLPXO76031 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLPXO76031 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.52□□□□□ -0.08
CLPXO76031 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPXO76031 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CLPXO76031 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPXO76031 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.52□□□□□ -0.08
CLPXO76031 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.52□□□□□ -0.08
CLPXO76031 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPXO76031 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPXO76031 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPXO76031 KRT8P39-201ENST00000396270 1433 ntBASIC14.52□□□□□ -0.08
CLPXO76031 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPXO76031 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
CLPXO76031 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLPXO76031 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.52□□□□□ -0.08
CLPXO76031 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CLPXO76031 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLPXO76031 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CLPXO76031 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLPXO76031 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLPXO76031 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CLPXO76031 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLPXO76031 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.52□□□□□ -0.09
CLPXO76031 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.52□□□□□ -0.09
CLPXO76031 KRT18P31-201ENST00000506277 1292 ntBASIC14.52□□□□□ -0.09
CLPXO76031 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.52□□□□□ -0.09
CLPXO76031 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLPXO76031 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.52□□□□□ -0.09
CLPXO76031 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.52□□□□□ -0.09
CLPXO76031 AC104692.2-201ENST00000603054 253 ntBASIC14.52□□□□□ -0.09
CLPXO76031 AL031008.1-201ENST00000619963 541 ntBASIC14.52□□□□□ -0.09
CLPXO76031 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.52□□□□□ -0.09
CLPXO76031 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CLPXO76031 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLPXO76031 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLPXO76031 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLPXO76031 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms