Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM3O75382 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM3O75382 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM3O75382 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM3O75382 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM3O75382 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TRIM3O75382 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM3O75382 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRIM3O75382 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRIM3O75382 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM3O75382 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRIM3O75382 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
TRIM3O75382 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
TRIM3O75382 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRIM3O75382 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TRIM3O75382 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRIM3O75382 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 HMGN1P19-201ENST00000436976 333 ntBASIC14.9□□□□□ -0.02
TRIM3O75382 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM3O75382 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 AC125807.1-201ENST00000483097 614 ntBASIC14.9□□□□□ -0.02
TRIM3O75382 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM3O75382 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.9□□□□□ -0.02
TRIM3O75382 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM3O75382 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
TRIM3O75382 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM3O75382 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRIM3O75382 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 AC092364.2-201ENST00000596710 2692 ntBASIC14.9□□□□□ -0.02
TRIM3O75382 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM3O75382 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM3O75382 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
TRIM3O75382 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM3O75382 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM3O75382 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM3O75382 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM3O75382 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM3O75382 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRIM3O75382 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM3O75382 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM3O75382 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM3O75382 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM3O75382 AC005622.1-201ENST00000636801 1703 ntBASIC14.89□□□□□ -0.03
TRIM3O75382 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM3O75382 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM3O75382 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM3O75382 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM3O75382 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
TRIM3O75382 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM3O75382 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM3O75382 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM3O75382 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM3O75382 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM3O75382 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM3O75382 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM3O75382 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM3O75382 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM3O75382 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM3O75382 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM3O75382 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM3O75382 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
TRIM3O75382 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM3O75382 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM3O75382 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms