Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AL365330.1-201ENST00000607459 531 ntBASIC12.39□□□□□ -0.43
PDE6DO43924 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
PDE6DO43924 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.39□□□□□ -0.43
PDE6DO43924 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.39□□□□□ -0.43
PDE6DO43924 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.39□□□□□ -0.43
PDE6DO43924 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.39□□□□□ -0.43
PDE6DO43924 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.39□□□□□ -0.43
PDE6DO43924 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
PDE6DO43924 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 AC005252.3-201ENST00000623855 2258 ntBASIC12.39□□□□□ -0.43
PDE6DO43924 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PDE6DO43924 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 SNORA78-201ENST00000459373 127 ntBASIC12.38□□□□□ -0.43
PDE6DO43924 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.38□□□□□ -0.43
PDE6DO43924 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.38□□□□□ -0.43
PDE6DO43924 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.38□□□□□ -0.43
PDE6DO43924 HYMAI.1-201ENST00000620949 238 ntBASIC12.38□□□□□ -0.43
PDE6DO43924 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.38□□□□□ -0.43
PDE6DO43924 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.38□□□□□ -0.43
PDE6DO43924 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.38□□□□□ -0.43
PDE6DO43924 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PDE6DO43924 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.38□□□□□ -0.43
PDE6DO43924 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PDE6DO43924 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.38□□□□□ -0.43
PDE6DO43924 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.37□□□□□ -0.43
PDE6DO43924 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
PDE6DO43924 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.37□□□□□ -0.43
PDE6DO43924 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
PDE6DO43924 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PDE6DO43924 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms