Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLOCKO15516 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.22■□□□□ 0.03
CLOCKO15516 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.22■□□□□ 0.03
CLOCKO15516 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLOCKO15516 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.22■□□□□ 0.03
CLOCKO15516 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.22■□□□□ 0.03
CLOCKO15516 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.22■□□□□ 0.03
CLOCKO15516 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLOCKO15516 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
CLOCKO15516 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLOCKO15516 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 U82695.1-201ENST00000635752 1889 ntBASIC15.21■□□□□ 0.03
CLOCKO15516 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.21■□□□□ 0.03
CLOCKO15516 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.21■□□□□ 0.03
CLOCKO15516 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLOCKO15516 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.21■□□□□ 0.03
CLOCKO15516 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.21■□□□□ 0.03
CLOCKO15516 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.21■□□□□ 0.03
CLOCKO15516 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.21■□□□□ 0.03
CLOCKO15516 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.21■□□□□ 0.03
CLOCKO15516 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.21■□□□□ 0.03
CLOCKO15516 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.21■□□□□ 0.03
CLOCKO15516 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.21■□□□□ 0.03
CLOCKO15516 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.21■□□□□ 0.03
CLOCKO15516 AC006538.3-201ENST00000612495 578 ntBASIC15.21■□□□□ 0.03
CLOCKO15516 MIR1199-201ENST00000621445 119 ntBASIC15.21■□□□□ 0.03
CLOCKO15516 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLOCKO15516 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.21■□□□□ 0.03
CLOCKO15516 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CLOCKO15516 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLOCKO15516 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLOCKO15516 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.21■□□□□ 0.02
CLOCKO15516 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLOCKO15516 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLOCKO15516 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLOCKO15516 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.21■□□□□ 0.02
CLOCKO15516 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 AP002414.3-201ENST00000589352 1468 ntBASIC15.2■□□□□ 0.02
CLOCKO15516 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.2■□□□□ 0.02
CLOCKO15516 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.2■□□□□ 0.02
CLOCKO15516 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CLOCKO15516 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.2■□□□□ 0.02
CLOCKO15516 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CLOCKO15516 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.2■□□□□ 0.02
CLOCKO15516 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.2■□□□□ 0.02
CLOCKO15516 MED15P5-201ENST00000423150 992 ntBASIC15.2■□□□□ 0.02
CLOCKO15516 RNA5SP415-201ENST00000517246 115 ntBASIC15.2■□□□□ 0.02
CLOCKO15516 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.2■□□□□ 0.02
CLOCKO15516 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.2■□□□□ 0.02
CLOCKO15516 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.2■□□□□ 0.02
CLOCKO15516 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CLOCKO15516 AC004706.3-202ENST00000621574 984 ntBASIC15.2■□□□□ 0.02
CLOCKO15516 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.2■□□□□ 0.02
CLOCKO15516 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.2■□□□□ 0.02
CLOCKO15516 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.2■□□□□ 0.02
CLOCKO15516 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLOCKO15516 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.2■□□□□ 0.02
CLOCKO15516 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.2■□□□□ 0.02
CLOCKO15516 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLOCKO15516 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLOCKO15516 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLOCKO15516 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.19■□□□□ 0.02
CLOCKO15516 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLOCKO15516 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CLOCKO15516 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.19■□□□□ 0.02
CLOCKO15516 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.19■□□□□ 0.02
CLOCKO15516 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms