Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.94■□□□□ 0.62
FOXN1O15353 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
FOXN1O15353 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.94■□□□□ 0.62
FOXN1O15353 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 AL671710.1-201ENST00000610245 2349 ntBASIC18.94■□□□□ 0.62
FOXN1O15353 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN1O15353 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.94■□□□□ 0.62
FOXN1O15353 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
FOXN1O15353 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
FOXN1O15353 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXN1O15353 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXN1O15353 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXN1O15353 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.93■□□□□ 0.62
FOXN1O15353 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXN1O15353 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
FOXN1O15353 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.93■□□□□ 0.62
FOXN1O15353 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.93■□□□□ 0.62
FOXN1O15353 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXN1O15353 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.93■□□□□ 0.62
FOXN1O15353 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.93■□□□□ 0.62
FOXN1O15353 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
FOXN1O15353 AL008638.5-201ENST00000623814 1298 ntBASIC18.93■□□□□ 0.62
FOXN1O15353 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.93■□□□□ 0.62
FOXN1O15353 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXN1O15353 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXN1O15353 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
FOXN1O15353 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN1O15353 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.92■□□□□ 0.62
FOXN1O15353 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
FOXN1O15353 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
FOXN1O15353 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.92■□□□□ 0.62
FOXN1O15353 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXN1O15353 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 CYP2T1P-202ENST00000641596 2535 ntBASIC18.92■□□□□ 0.62
FOXN1O15353 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXN1O15353 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.92■□□□□ 0.62
FOXN1O15353 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.92■□□□□ 0.62
FOXN1O15353 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.92■□□□□ 0.62
FOXN1O15353 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
FOXN1O15353 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXN1O15353 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.92■□□□□ 0.62
FOXN1O15353 CASP16P-204ENST00000635032 809 ntBASIC18.92■□□□□ 0.62
FOXN1O15353 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.92■□□□□ 0.62
FOXN1O15353 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.92■□□□□ 0.62
FOXN1O15353 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN1O15353 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXN1O15353 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXN1O15353 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
FOXN1O15353 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXN1O15353 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXN1O15353 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
FOXN1O15353 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXN1O15353 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXN1O15353 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN1O15353 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms