Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 RN7SL828P-201ENST00000607615 303 ntBASIC15.24■□□□□ 0.03
PCDH17O14917 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH17O14917 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
PCDH17O14917 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH17O14917 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH17O14917 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH17O14917 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH17O14917 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH17O14917 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PCDH17O14917 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH17O14917 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH17O14917 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDH17O14917 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDH17O14917 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH17O14917 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCDH17O14917 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH17O14917 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
PCDH17O14917 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH17O14917 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDH17O14917 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDH17O14917 AC027369.6-201ENST00000525520 931 ntBASIC15.23■□□□□ 0.03
PCDH17O14917 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH17O14917 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCDH17O14917 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH17O14917 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDH17O14917 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH17O14917 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 AC073347.1-201ENST00000421633 2643 ntBASIC15.23■□□□□ 0.03
PCDH17O14917 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDH17O14917 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH17O14917 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDH17O14917 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDH17O14917 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PCDH17O14917 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDH17O14917 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDH17O14917 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDH17O14917 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDH17O14917 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDH17O14917 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDH17O14917 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDH17O14917 AC092580.3-201ENST00000430932 139 ntBASIC15.22■□□□□ 0.03
PCDH17O14917 AC244107.1-201ENST00000442033 332 ntBASIC15.22■□□□□ 0.03
PCDH17O14917 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDH17O14917 AC245100.5-201ENST00000452108 331 ntBASIC15.22■□□□□ 0.03
PCDH17O14917 SERBP1P3-201ENST00000459980 809 ntBASIC15.22■□□□□ 0.03
PCDH17O14917 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDH17O14917 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDH17O14917 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.22■□□□□ 0.03
PCDH17O14917 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
PCDH17O14917 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 AL390754.1-201ENST00000619088 582 ntBASIC15.22■□□□□ 0.03
PCDH17O14917 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDH17O14917 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDH17O14917 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDH17O14917 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms