Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC24.93■■□□□ 1.58
CHD1O14646 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1O14646 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC24.93■■□□□ 1.58
CHD1O14646 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1O14646 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC24.93■■□□□ 1.58
CHD1O14646 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1O14646 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1O14646 AC005915.1-201ENST00000624912 2018 ntBASIC24.93■■□□□ 1.58
CHD1O14646 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD1O14646 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC24.92■■□□□ 1.58
CHD1O14646 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1O14646 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1O14646 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1O14646 AC010141.1-201ENST00000411585 623 ntBASIC24.92■■□□□ 1.58
CHD1O14646 HPGD-203ENST00000422112 805 ntTSL 2 BASIC24.92■■□□□ 1.58
CHD1O14646 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1O14646 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC24.92■■□□□ 1.58
CHD1O14646 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC24.92■■□□□ 1.58
CHD1O14646 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1O14646 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
CHD1O14646 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC24.92■■□□□ 1.58
CHD1O14646 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1O14646 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1O14646 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1O14646 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1O14646 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
CHD1O14646 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC24.92■■□□□ 1.58
CHD1O14646 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1O14646 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1O14646 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1O14646 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC24.92■■□□□ 1.58
CHD1O14646 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD1O14646 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC24.92■■□□□ 1.58
CHD1O14646 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC24.92■■□□□ 1.58
CHD1O14646 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC24.92■■□□□ 1.58
CHD1O14646 FAM90A7P-201ENST00000382628 1395 ntBASIC24.91■■□□□ 1.58
CHD1O14646 FAM90A23P-201ENST00000400136 1395 ntBASIC24.91■■□□□ 1.58
CHD1O14646 AC090502.4-201ENST00000551714 1386 ntBASIC24.91■■□□□ 1.58
CHD1O14646 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1O14646 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
CHD1O14646 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC24.91■■□□□ 1.58
CHD1O14646 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC24.91■■□□□ 1.58
CHD1O14646 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1O14646 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1O14646 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1O14646 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC24.91■■□□□ 1.58
CHD1O14646 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC24.91■■□□□ 1.58
CHD1O14646 RPL8P2-201ENST00000430538 502 ntBASIC24.91■■□□□ 1.58
CHD1O14646 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC24.91■■□□□ 1.58
CHD1O14646 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1O14646 PAM16-211ENST00000575848 518 ntTSL 3 BASIC24.91■■□□□ 1.58
CHD1O14646 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
CHD1O14646 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC24.91■■□□□ 1.58
CHD1O14646 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHD1O14646 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CHD1O14646 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC24.91■■□□□ 1.58
CHD1O14646 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC24.91■■□□□ 1.58
CHD1O14646 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC24.9■■□□□ 1.58
CHD1O14646 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC24.9■■□□□ 1.58
CHD1O14646 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1O14646 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC24.9■■□□□ 1.58
CHD1O14646 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1O14646 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1O14646 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
CHD1O14646 RN7SL258P-201ENST00000478664 300 ntBASIC24.9■■□□□ 1.58
CHD1O14646 EHF-205ENST00000527935 557 ntTSL 2 BASIC24.9■■□□□ 1.58
CHD1O14646 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1O14646 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC24.9■■□□□ 1.58
CHD1O14646 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC24.9■■□□□ 1.58
CHD1O14646 ETV2-207ENST00000619399 994 ntTSL 5 BASIC24.9■■□□□ 1.58
CHD1O14646 AC244250.3-201ENST00000620749 366 ntBASIC24.9■■□□□ 1.58
CHD1O14646 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CHD1O14646 AL603764.1-201ENST00000636452 321 ntBASIC24.9■■□□□ 1.58
CHD1O14646 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1O14646 AC055811.4-201ENST00000624039 1754 ntBASIC24.9■■□□□ 1.58
CHD1O14646 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
CHD1O14646 AP000593.2-201ENST00000542775 1433 ntBASIC24.9■■□□□ 1.58
CHD1O14646 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1O14646 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1O14646 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1O14646 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1O14646 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHD1O14646 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
CHD1O14646 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHD1O14646 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CHD1O14646 BUD31-205ENST00000456893 512 ntTSL 5 BASIC24.89■■□□□ 1.58
CHD1O14646 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC24.89■■□□□ 1.58
CHD1O14646 AC004066.1-201ENST00000502488 802 ntBASIC24.89■■□□□ 1.58
CHD1O14646 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC24.89■■□□□ 1.58
CHD1O14646 Z98259.2-201ENST00000641583 609 ntBASIC24.89■■□□□ 1.58
CHD1O14646 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC24.89■■□□□ 1.58
CHD1O14646 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC24.89■■□□□ 1.58
CHD1O14646 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHD1O14646 SHC1P1-201ENST00000425230 1745 ntBASIC24.89■■□□□ 1.58
CHD1O14646 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
CHD1O14646 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
CHD1O14646 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD1O14646 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD1O14646 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC24.89■■□□□ 1.57
CHD1O14646 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC24.89■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms