Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HFM1A2PYH4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC23.15■■□□□ 1.3
HFM1A2PYH4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
HFM1A2PYH4 AC106760.1-201ENST00000508690 800 ntBASIC23.15■■□□□ 1.3
HFM1A2PYH4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
HFM1A2PYH4 AP001063.1-201ENST00000568332 529 ntBASIC23.15■■□□□ 1.3
HFM1A2PYH4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC23.15■■□□□ 1.3
HFM1A2PYH4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
HFM1A2PYH4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HFM1A2PYH4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
HFM1A2PYH4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
HFM1A2PYH4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
HFM1A2PYH4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
HFM1A2PYH4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
HFM1A2PYH4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
HFM1A2PYH4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
HFM1A2PYH4 AC018665.1-201ENST00000622927 1362 ntBASIC23.14■■□□□ 1.29
HFM1A2PYH4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
HFM1A2PYH4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC23.14■■□□□ 1.29
HFM1A2PYH4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HFM1A2PYH4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HFM1A2PYH4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
HFM1A2PYH4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
HFM1A2PYH4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HFM1A2PYH4 AC005229.1-201ENST00000392885 409 ntBASIC23.14■■□□□ 1.29
HFM1A2PYH4 RPL5P21-201ENST00000404620 815 ntBASIC23.14■■□□□ 1.29
HFM1A2PYH4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC23.14■■□□□ 1.29
HFM1A2PYH4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC23.14■■□□□ 1.29
HFM1A2PYH4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HFM1A2PYH4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HFM1A2PYH4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HFM1A2PYH4 SNX29P1-201ENST00000548357 1007 ntBASIC23.14■■□□□ 1.29
HFM1A2PYH4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC23.14■■□□□ 1.29
HFM1A2PYH4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC23.14■■□□□ 1.29
HFM1A2PYH4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HFM1A2PYH4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HFM1A2PYH4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC23.14■■□□□ 1.29
HFM1A2PYH4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HFM1A2PYH4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
HFM1A2PYH4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HFM1A2PYH4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HFM1A2PYH4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HFM1A2PYH4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC23.13■■□□□ 1.29
HFM1A2PYH4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HFM1A2PYH4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HFM1A2PYH4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC23.13■■□□□ 1.29
HFM1A2PYH4 AL138799.1-201ENST00000448213 1675 ntBASIC23.13■■□□□ 1.29
HFM1A2PYH4 ANKRD19P-201ENST00000338192 862 ntBASIC23.13■■□□□ 1.29
HFM1A2PYH4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HFM1A2PYH4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC23.13■■□□□ 1.29
HFM1A2PYH4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
HFM1A2PYH4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HFM1A2PYH4 AC022494.1-201ENST00000466044 728 ntBASIC23.13■■□□□ 1.29
HFM1A2PYH4 AP001889.1-201ENST00000525414 633 ntBASIC23.13■■□□□ 1.29
HFM1A2PYH4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
HFM1A2PYH4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HFM1A2PYH4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HFM1A2PYH4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HFM1A2PYH4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
HFM1A2PYH4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HFM1A2PYH4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC23.12■■□□□ 1.29
HFM1A2PYH4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
HFM1A2PYH4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 AC092850.2-201ENST00000623821 2697 ntBASIC23.12■■□□□ 1.29
HFM1A2PYH4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC23.12■■□□□ 1.29
HFM1A2PYH4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
HFM1A2PYH4 RNU1-114P-201ENST00000365297 166 ntBASIC23.12■■□□□ 1.29
HFM1A2PYH4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC23.12■■□□□ 1.29
HFM1A2PYH4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC23.12■■□□□ 1.29
HFM1A2PYH4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC23.12■■□□□ 1.29
HFM1A2PYH4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC23.12■■□□□ 1.29
HFM1A2PYH4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC23.12■■□□□ 1.29
HFM1A2PYH4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC23.12■■□□□ 1.29
HFM1A2PYH4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC23.12■■□□□ 1.29
HFM1A2PYH4 AC020658.6-201ENST00000623564 1870 ntBASIC23.12■■□□□ 1.29
HFM1A2PYH4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
HFM1A2PYH4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
HFM1A2PYH4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HFM1A2PYH4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC23.11■■□□□ 1.29
HFM1A2PYH4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HFM1A2PYH4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HFM1A2PYH4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC23.11■■□□□ 1.29
HFM1A2PYH4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC23.11■■□□□ 1.29
HFM1A2PYH4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC23.11■■□□□ 1.29
HFM1A2PYH4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC23.11■■□□□ 1.29
HFM1A2PYH4 TDH-203ENST00000531764 1110 ntBASIC23.11■■□□□ 1.29
HFM1A2PYH4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
HFM1A2PYH4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms