Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 FAM8A3P-201ENST00000427218 844 ntBASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 AL355877.3-201ENST00000622820 899 ntBASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRDV1A0A1B0GX56 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.02□□□□□ -0.16
TRDV1A0A1B0GX56 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 LAGE3P1-201ENST00000425356 484 ntBASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 AC093827.2-201ENST00000512654 315 ntBASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 AC008667.4-201ENST00000607370 168 ntBASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.02□□□□□ -0.17
TRDV1A0A1B0GX56 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 AC041040.2-201ENST00000622926 2899 ntBASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms