Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 TREML5P-201ENST00000421694 576 ntBASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 PMS2P2-201ENST00000425039 1128 ntBASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 RN7SL618P-201ENST00000477850 296 ntBASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC092850.2-201ENST00000623821 2697 ntBASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC105917.1-201ENST00000506637 2539 ntBASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC087499.5-201ENST00000452760 1342 ntBASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC196A0A1B0GTZ2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC092580.3-201ENST00000430932 139 ntBASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 DUX4L27-201ENST00000554796 1261 ntBASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC196A0A1B0GTZ2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC196A0A1B0GTZ2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms