Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 SSR1P1-201ENST00000407630 814 ntBASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 AC105339.1-204ENST00000636249 355 ntBASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHGA11Q9Y5H2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 AC004987.2-201ENST00000395959 1148 ntBASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 AC069335.1-201ENST00000489972 472 ntBASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 YBX1P5-201ENST00000509441 847 ntBASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PCDHGA11Q9Y5H2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 SLC25A39P2-201ENST00000537614 270 ntBASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 MIR4469-201ENST00000583919 79 ntBASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 AC022145.2-201ENST00000598203 171 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms