Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDZRN3Q9UPQ7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 AC069224.1-201ENST00000566372 1715 ntBASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 AL592424.1-201ENST00000563624 1536 ntBASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 AP005117.1-202ENST00000581724 1908 ntBASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.5■□□□□ 0.87
PDZRN3Q9UPQ7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 MIR658-201ENST00000385210 100 ntBASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 AC022210.1-201ENST00000449856 793 ntBASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.49■□□□□ 0.87
PDZRN3Q9UPQ7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 AL512361.1-201ENST00000554200 418 ntBASIC20.48■□□□□ 0.87
PDZRN3Q9UPQ7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms