Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 AC092364.2-201ENST00000596710 2692 ntBASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 AP006294.1-201ENST00000415407 339 ntBASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 MYCLP2-201ENST00000449268 967 ntBASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 SLED1-202ENST00000512051 380 ntBASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 AL158212.4-201ENST00000624062 1286 ntBASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 AC011477.6-201ENST00000604980 1927 ntBASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.13□□□□□ -0.15
CLCF1Q9UBD9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 AL139384.1-201ENST00000612143 3047 ntBASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 AC098850.1-201ENST00000419919 790 ntBASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 ELK1P1-201ENST00000485699 580 ntBASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 AC097359.3-201ENST00000603982 1210 ntBASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
CLCF1Q9UBD9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.11□□□□□ -0.15
CLCF1Q9UBD9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms