Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 AC092919.2-201ENST00000623631 1645 ntBASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALCOCO1Q9P1Z2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 BCAR1-209ENST00000546196 1340 ntBASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 MKNK2P1-201ENST00000437526 628 ntBASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 PDPK2P-202ENST00000562415 1191 ntBASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 MIR4515-201ENST00000584082 81 ntBASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 ELL2P1-201ENST00000413990 1906 ntBASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.49■□□□□ 0.39
CALCOCO1Q9P1Z2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 CNN2P11-201ENST00000429351 262 ntBASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 CEND1P1-201ENST00000451006 455 ntBASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 PPT1-215ENST00000641471 2368 ntBASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALCOCO1Q9P1Z2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms