Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HACD3Q9P035 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HACD3Q9P035 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HACD3Q9P035 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HACD3Q9P035 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
HACD3Q9P035 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.16■□□□□ 0.18
HACD3Q9P035 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.16■□□□□ 0.18
HACD3Q9P035 AC003101.2-201ENST00000612557 442 ntBASIC16.16■□□□□ 0.18
HACD3Q9P035 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.16■□□□□ 0.18
HACD3Q9P035 MIR6080-201ENST00000617359 66 ntBASIC16.16■□□□□ 0.18
HACD3Q9P035 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.16■□□□□ 0.18
HACD3Q9P035 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.16■□□□□ 0.18
HACD3Q9P035 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HACD3Q9P035 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HACD3Q9P035 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HACD3Q9P035 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
HACD3Q9P035 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
HACD3Q9P035 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HACD3Q9P035 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HACD3Q9P035 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HACD3Q9P035 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
HACD3Q9P035 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HACD3Q9P035 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HACD3Q9P035 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HACD3Q9P035 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
HACD3Q9P035 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HACD3Q9P035 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HACD3Q9P035 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.15■□□□□ 0.18
HACD3Q9P035 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.15■□□□□ 0.18
HACD3Q9P035 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
HACD3Q9P035 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.15■□□□□ 0.18
HACD3Q9P035 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
HACD3Q9P035 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HACD3Q9P035 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.15■□□□□ 0.18
HACD3Q9P035 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.15■□□□□ 0.18
HACD3Q9P035 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.15■□□□□ 0.18
HACD3Q9P035 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.15■□□□□ 0.18
HACD3Q9P035 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HACD3Q9P035 AC069262.1-201ENST00000539058 672 ntBASIC16.15■□□□□ 0.18
HACD3Q9P035 AC025678.2-201ENST00000562061 970 ntBASIC16.15■□□□□ 0.18
HACD3Q9P035 AC105021.1-202ENST00000570572 669 ntBASIC16.15■□□□□ 0.18
HACD3Q9P035 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.15■□□□□ 0.18
HACD3Q9P035 AC006538.3-201ENST00000612495 578 ntBASIC16.15■□□□□ 0.18
HACD3Q9P035 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.15■□□□□ 0.18
HACD3Q9P035 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.15■□□□□ 0.18
HACD3Q9P035 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.15■□□□□ 0.18
HACD3Q9P035 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
HACD3Q9P035 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.15■□□□□ 0.18
HACD3Q9P035 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HACD3Q9P035 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.15■□□□□ 0.18
HACD3Q9P035 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.15■□□□□ 0.18
HACD3Q9P035 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HACD3Q9P035 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.14■□□□□ 0.18
HACD3Q9P035 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.14■□□□□ 0.17
HACD3Q9P035 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.14■□□□□ 0.17
HACD3Q9P035 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HACD3Q9P035 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HACD3Q9P035 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.14■□□□□ 0.17
HACD3Q9P035 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.14■□□□□ 0.17
HACD3Q9P035 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.14■□□□□ 0.17
HACD3Q9P035 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.14■□□□□ 0.17
HACD3Q9P035 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.14■□□□□ 0.17
HACD3Q9P035 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.14■□□□□ 0.17
HACD3Q9P035 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HACD3Q9P035 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms