Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 GNRHR2-203ENST00000581100 1187 ntBASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 AC107373.2-201ENST00000607735 490 ntBASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 MIR6787-201ENST00000616675 61 ntBASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 AC009542.2-202ENST00000619004 1067 ntBASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.39■□□□□ 0.21
HCFC1R1Q9NWW0 KRT8P44-201ENST00000441609 1350 ntBASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 AP001582.1-201ENST00000525856 295 ntBASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 KRT90P-201ENST00000549264 1064 ntBASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HCFC1R1Q9NWW0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HCFC1R1Q9NWW0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms