Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 AL732292.2-201ENST00000609649 430 ntBASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 AL805961.1-202ENST00000641562 540 ntBASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 AL353732.1-201ENST00000569618 1459 ntBASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 AC041040.2-201ENST00000622926 2899 ntBASIC13.97□□□□□ -0.17
C12orf4Q9NQ89 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 CICP23-201ENST00000605013 2741 ntBASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 PTCHD3P3-201ENST00000403073 906 ntBASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 AC087641.1-201ENST00000557561 1021 ntBASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 MTDHP4-201ENST00000600287 670 ntBASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 AL355877.3-201ENST00000622820 899 ntBASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C12orf4Q9NQ89 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms