Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 AL020989.1-201ENST00000422979 469 ntBASIC14.58□□□□□ -0.08
HMG20AQ9NP66 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 SIGLEC30P-201ENST00000455569 941 ntBASIC14.58□□□□□ -0.08
HMG20AQ9NP66 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 AC099336.1-202ENST00000602961 463 ntBASIC14.58□□□□□ -0.08
HMG20AQ9NP66 AC092119.3-201ENST00000612618 583 ntBASIC14.58□□□□□ -0.08
HMG20AQ9NP66 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HMG20AQ9NP66 AGAP7P-201ENST00000582299 2062 ntBASIC14.57□□□□□ -0.08
HMG20AQ9NP66 AGAP14-201ENST00000624701 2060 ntBASIC14.57□□□□□ -0.08
HMG20AQ9NP66 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 ARMC10P1-201ENST00000313754 855 ntBASIC14.57□□□□□ -0.08
HMG20AQ9NP66 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 AL445228.2-201ENST00000605589 952 ntBASIC14.57□□□□□ -0.08
HMG20AQ9NP66 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HMG20AQ9NP66 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 SPDYE21P-201ENST00000413323 827 ntBASIC14.56□□□□□ -0.08
HMG20AQ9NP66 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 MIR5100-201ENST00000579544 119 ntBASIC14.56□□□□□ -0.08
HMG20AQ9NP66 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.56□□□□□ -0.08
HMG20AQ9NP66 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HMG20AQ9NP66 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms