Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 AL031595.1-201ENST00000623969 4709 ntBASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SND1-IT1Q9HBX3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 CICP23-201ENST00000605013 2741 ntBASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 AC132008.2-207ENST00000454517 770 ntBASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 AC139887.3-201ENST00000568585 713 ntBASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SND1-IT1Q9HBX3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 AC005622.1-201ENST00000636801 1703 ntBASIC10.72□□□□□ -0.69
SND1-IT1Q9HBX3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms