Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIK2Q9H0K1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SIK2Q9H0K1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SIK2Q9H0K1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.54■□□□□ 0.24
SIK2Q9H0K1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.54■□□□□ 0.24
SIK2Q9H0K1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.54■□□□□ 0.24
SIK2Q9H0K1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIK2Q9H0K1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.54■□□□□ 0.24
SIK2Q9H0K1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.54■□□□□ 0.24
SIK2Q9H0K1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIK2Q9H0K1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.54■□□□□ 0.24
SIK2Q9H0K1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 AC011477.6-201ENST00000604980 1927 ntBASIC16.53■□□□□ 0.24
SIK2Q9H0K1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.53■□□□□ 0.24
SIK2Q9H0K1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 AL512361.1-201ENST00000554200 418 ntBASIC16.53■□□□□ 0.24
SIK2Q9H0K1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.53■□□□□ 0.24
SIK2Q9H0K1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 PKD1P5-201ENST00000532415 10291 ntBASIC16.52■□□□□ 0.24
SIK2Q9H0K1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 AC087499.5-201ENST00000452760 1342 ntBASIC16.52■□□□□ 0.24
SIK2Q9H0K1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 FO393414.2-201ENST00000405153 598 ntBASIC16.52■□□□□ 0.24
SIK2Q9H0K1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 TSSK5P-201ENST00000423978 907 ntBASIC16.52■□□□□ 0.24
SIK2Q9H0K1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 HIST3H2BA-201ENST00000436555 524 ntBASIC16.52■□□□□ 0.24
SIK2Q9H0K1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 PHKG1P2-201ENST00000457537 863 ntBASIC16.52■□□□□ 0.24
SIK2Q9H0K1 RN7SL618P-201ENST00000477850 296 ntBASIC16.52■□□□□ 0.24
SIK2Q9H0K1 INGX-202ENST00000489074 768 ntBASIC16.52■□□□□ 0.24
SIK2Q9H0K1 RNA5SP421-201ENST00000516864 134 ntBASIC16.52■□□□□ 0.24
SIK2Q9H0K1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SIK2Q9H0K1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIK2Q9H0K1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.23
SIK2Q9H0K1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIK2Q9H0K1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SIK2Q9H0K1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.52■□□□□ 0.23
SIK2Q9H0K1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIK2Q9H0K1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms