Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.7□□□□□ -0.22
CMSS1Q9BQ75 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 RPS2P28-201ENST00000314255 741 ntBASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 AL513480.1-201ENST00000451731 511 ntBASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 IFNL4P1-201ENST00000607083 540 ntBASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 AC020658.6-201ENST00000623564 1870 ntBASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 AC107918.4-201ENST00000641966 3141 ntBASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 AC136621.1-201ENST00000624017 2304 ntBASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CMSS1Q9BQ75 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 AC023157.3-201ENST00000619086 2088 ntBASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 TMBIM7P-203ENST00000641617 1718 ntBASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 AC093724.1-201ENST00000448659 1027 ntBASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.68□□□□□ -0.22
CMSS1Q9BQ75 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms