Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 AL365203.3-201ENST00000609742 2057 ntBASIC13.35□□□□□ -0.27
CCL13Q99616 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL13Q99616 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL13Q99616 AL080243.2-201ENST00000418783 582 ntBASIC13.35□□□□□ -0.27
CCL13Q99616 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL13Q99616 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCL13Q99616 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL13Q99616 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL13Q99616 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.35□□□□□ -0.27
CCL13Q99616 TEX28P1-201ENST00000613479 1221 ntBASIC13.35□□□□□ -0.27
CCL13Q99616 TEX28P2-201ENST00000617764 1221 ntBASIC13.35□□□□□ -0.27
CCL13Q99616 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL13Q99616 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL13Q99616 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL13Q99616 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL13Q99616 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.35□□□□□ -0.27
CCL13Q99616 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CCL13Q99616 PAUPAR-201ENST00000630360 2965 ntBASIC13.35□□□□□ -0.27
CCL13Q99616 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL13Q99616 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCL13Q99616 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL13Q99616 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CCL13Q99616 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL13Q99616 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.34□□□□□ -0.27
CCL13Q99616 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.34□□□□□ -0.27
CCL13Q99616 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL13Q99616 AC093214.1-201ENST00000511688 1107 ntBASIC13.34□□□□□ -0.27
CCL13Q99616 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL13Q99616 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.34□□□□□ -0.27
CCL13Q99616 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.34□□□□□ -0.27
CCL13Q99616 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL13Q99616 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL13Q99616 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
CCL13Q99616 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL13Q99616 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCL13Q99616 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL13Q99616 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL13Q99616 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCL13Q99616 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CCL13Q99616 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL13Q99616 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL13Q99616 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL13Q99616 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.33□□□□□ -0.27
CCL13Q99616 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL13Q99616 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
CCL13Q99616 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.33□□□□□ -0.27
CCL13Q99616 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL13Q99616 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
CCL13Q99616 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL13Q99616 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCL13Q99616 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL13Q99616 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL13Q99616 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
CCL13Q99616 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 AC100757.3-201ENST00000622361 1406 ntBASIC13.33□□□□□ -0.28
CCL13Q99616 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
CCL13Q99616 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL13Q99616 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL13Q99616 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms