Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NDNQ99608 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDNQ99608 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.03■□□□□ 0.16
NDNQ99608 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
NDNQ99608 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.03■□□□□ 0.16
NDNQ99608 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.03■□□□□ 0.16
NDNQ99608 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.03■□□□□ 0.16
NDNQ99608 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.03■□□□□ 0.16
NDNQ99608 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 KRT18P58-201ENST00000527480 1120 ntBASIC16.03■□□□□ 0.16
NDNQ99608 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
NDNQ99608 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.03■□□□□ 0.16
NDNQ99608 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 SPTSSB-204ENST00000617024 1292 ntBASIC16.03■□□□□ 0.16
NDNQ99608 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.03■□□□□ 0.16
NDNQ99608 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
NDNQ99608 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NDNQ99608 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDNQ99608 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.02■□□□□ 0.16
NDNQ99608 AL359258.3-201ENST00000622910 2331 ntBASIC16.02■□□□□ 0.16
NDNQ99608 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NDNQ99608 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
NDNQ99608 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NDNQ99608 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDNQ99608 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDNQ99608 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDNQ99608 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NDNQ99608 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.02■□□□□ 0.16
NDNQ99608 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NDNQ99608 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
NDNQ99608 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NDNQ99608 YBX2P1-201ENST00000394192 760 ntBASIC16.02■□□□□ 0.16
NDNQ99608 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.02■□□□□ 0.16
NDNQ99608 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.02■□□□□ 0.16
NDNQ99608 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.02■□□□□ 0.16
NDNQ99608 AC098859.1-201ENST00000502915 1238 ntBASIC16.02■□□□□ 0.16
NDNQ99608 KRT8P48-201ENST00000515599 1220 ntBASIC16.02■□□□□ 0.16
NDNQ99608 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.02■□□□□ 0.16
NDNQ99608 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.02■□□□□ 0.16
NDNQ99608 AC243562.1-201ENST00000560672 389 ntBASIC16.02■□□□□ 0.16
NDNQ99608 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.02■□□□□ 0.16
NDNQ99608 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.02■□□□□ 0.16
NDNQ99608 AC008267.7-201ENST00000624570 1194 ntBASIC16.02■□□□□ 0.16
NDNQ99608 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.02■□□□□ 0.16
NDNQ99608 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.02■□□□□ 0.16
NDNQ99608 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NDNQ99608 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NDNQ99608 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NDNQ99608 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NDNQ99608 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
NDNQ99608 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NDNQ99608 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.02■□□□□ 0.15
NDNQ99608 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
NDNQ99608 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
NDNQ99608 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
NDNQ99608 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NDNQ99608 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms