Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
EYA3Q99504 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.18■□□□□ 0.66
EYA3Q99504 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.18■□□□□ 0.66
EYA3Q99504 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.18■□□□□ 0.66
EYA3Q99504 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.18■□□□□ 0.66
EYA3Q99504 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
EYA3Q99504 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.18■□□□□ 0.66
EYA3Q99504 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.18■□□□□ 0.66
EYA3Q99504 RPL13AP20-201ENST00000459725 609 ntBASIC19.18■□□□□ 0.66
EYA3Q99504 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
EYA3Q99504 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.18■□□□□ 0.66
EYA3Q99504 AC023310.1-201ENST00000554836 735 ntBASIC19.18■□□□□ 0.66
EYA3Q99504 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.18■□□□□ 0.66
EYA3Q99504 GNRHR2-203ENST00000581100 1187 ntBASIC19.18■□□□□ 0.66
EYA3Q99504 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.18■□□□□ 0.66
EYA3Q99504 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 AC005052.1-201ENST00000625181 2492 ntBASIC19.18■□□□□ 0.66
EYA3Q99504 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EYA3Q99504 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 ALOX12P2-203ENST00000570921 1945 ntBASIC19.17■□□□□ 0.66
EYA3Q99504 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.17■□□□□ 0.66
EYA3Q99504 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.17■□□□□ 0.66
EYA3Q99504 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.17■□□□□ 0.66
EYA3Q99504 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.17■□□□□ 0.66
EYA3Q99504 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.17■□□□□ 0.66
EYA3Q99504 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.17■□□□□ 0.66
EYA3Q99504 CNN2P8-201ENST00000421872 913 ntBASIC19.17■□□□□ 0.66
EYA3Q99504 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.17■□□□□ 0.66
EYA3Q99504 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.17■□□□□ 0.66
EYA3Q99504 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.17■□□□□ 0.66
EYA3Q99504 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
EYA3Q99504 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.17■□□□□ 0.66
EYA3Q99504 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.17■□□□□ 0.66
EYA3Q99504 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.17■□□□□ 0.66
EYA3Q99504 AC243960.2-201ENST00000600996 747 ntBASIC19.17■□□□□ 0.66
EYA3Q99504 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.17■□□□□ 0.66
EYA3Q99504 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
EYA3Q99504 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EYA3Q99504 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.16■□□□□ 0.66
EYA3Q99504 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.16■□□□□ 0.66
EYA3Q99504 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
EYA3Q99504 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
EYA3Q99504 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 AL133267.1-201ENST00000398220 340 ntBASIC19.16■□□□□ 0.66
EYA3Q99504 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
EYA3Q99504 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.16■□□□□ 0.66
EYA3Q99504 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EYA3Q99504 AP001582.1-201ENST00000525856 295 ntBASIC19.16■□□□□ 0.66
EYA3Q99504 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.16■□□□□ 0.66
EYA3Q99504 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.16■□□□□ 0.66
EYA3Q99504 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.16■□□□□ 0.66
EYA3Q99504 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.16■□□□□ 0.66
EYA3Q99504 AC107373.2-201ENST00000607735 490 ntBASIC19.16■□□□□ 0.66
EYA3Q99504 AC091271.1-201ENST00000611877 1162 ntBASIC19.16■□□□□ 0.66
EYA3Q99504 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EYA3Q99504 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.16■□□□□ 0.66
EYA3Q99504 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.16■□□□□ 0.66
EYA3Q99504 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EYA3Q99504 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
EYA3Q99504 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EYA3Q99504 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms