Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 SNX18-202ENST00000343017 3140 ntBASIC12.98□□□□□ -0.33
RAB40CQ96S21 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 AC006504.4-201ENST00000592118 1568 ntBASIC12.98□□□□□ -0.33
RAB40CQ96S21 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.98□□□□□ -0.33
RAB40CQ96S21 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.98□□□□□ -0.33
RAB40CQ96S21 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RAB40CQ96S21 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 LINC00528-201ENST00000600723 2160 ntBASIC12.97□□□□□ -0.33
RAB40CQ96S21 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 AC091951.1-201ENST00000512854 2465 ntBASIC12.97□□□□□ -0.33
RAB40CQ96S21 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 RNU1-129P-201ENST00000384064 167 ntBASIC12.97□□□□□ -0.33
RAB40CQ96S21 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 KRT18P56-201ENST00000507275 550 ntBASIC12.97□□□□□ -0.33
RAB40CQ96S21 AP002469.2-201ENST00000531724 424 ntBASIC12.97□□□□□ -0.33
RAB40CQ96S21 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 U1.21-201ENST00000580816 167 ntBASIC12.97□□□□□ -0.33
RAB40CQ96S21 MTDHP3-201ENST00000594186 672 ntBASIC12.97□□□□□ -0.33
RAB40CQ96S21 LINC01711-201ENST00000598340 967 ntBASIC12.97□□□□□ -0.33
RAB40CQ96S21 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.97□□□□□ -0.33
RAB40CQ96S21 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.97□□□□□ -0.33
RAB40CQ96S21 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RAB40CQ96S21 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB40CQ96S21 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 KRT8P44-201ENST00000441609 1350 ntBASIC12.96□□□□□ -0.33
RAB40CQ96S21 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB40CQ96S21 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB40CQ96S21 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms