Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.06■□□□□ 0
NR1H4Q96RI1 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.06■□□□□ 0
NR1H4Q96RI1 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
NR1H4Q96RI1 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 AC011477.6-201ENST00000604980 1927 ntBASIC15.06■□□□□ 0
NR1H4Q96RI1 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
NR1H4Q96RI1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.06■□□□□ 0
NR1H4Q96RI1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.06■□□□□ 0
NR1H4Q96RI1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NR1H4Q96RI1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.06■□□□□ 0
NR1H4Q96RI1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.06■□□□□ 0
NR1H4Q96RI1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 BX664615.1-201ENST00000443558 458 ntBASIC15.06■□□□□ 0
NR1H4Q96RI1 YBX1P2-201ENST00000489612 999 ntBASIC15.06■□□□□ 0
NR1H4Q96RI1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NR1H4Q96RI1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.06■□□□□ 0
NR1H4Q96RI1 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NR1H4Q96RI1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.06■□□□□ 0
NR1H4Q96RI1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.06■□□□□ 0
NR1H4Q96RI1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H4Q96RI1 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.05■□□□□ 0
NR1H4Q96RI1 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NR1H4Q96RI1 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
NR1H4Q96RI1 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
NR1H4Q96RI1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NR1H4Q96RI1 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.05■□□□□ 0
NR1H4Q96RI1 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
NR1H4Q96RI1 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NR1H4Q96RI1 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.05■□□□□ 0
NR1H4Q96RI1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NR1H4Q96RI1 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NR1H4Q96RI1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.05■□□□□ -0
NR1H4Q96RI1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H4Q96RI1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
NR1H4Q96RI1 STARP1-201ENST00000397973 869 ntBASIC15.05■□□□□ -0
NR1H4Q96RI1 AC113347.1-201ENST00000413321 391 ntBASIC15.05■□□□□ -0
NR1H4Q96RI1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H4Q96RI1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H4Q96RI1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.05■□□□□ -0
NR1H4Q96RI1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR1H4Q96RI1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.05■□□□□ -0
NR1H4Q96RI1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
NR1H4Q96RI1 MIR4492-201ENST00000581627 80 ntBASIC15.05■□□□□ -0
NR1H4Q96RI1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.05■□□□□ -0
NR1H4Q96RI1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H4Q96RI1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR1H4Q96RI1 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NR1H4Q96RI1 TOP3BP1-201ENST00000420768 1380 ntBASIC15.05■□□□□ -0
NR1H4Q96RI1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.05■□□□□ -0
NR1H4Q96RI1 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
NR1H4Q96RI1 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H4Q96RI1 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.05■□□□□ -0
NR1H4Q96RI1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H4Q96RI1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.05■□□□□ -0
NR1H4Q96RI1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.05■□□□□ -0
NR1H4Q96RI1 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.05■□□□□ -0
NR1H4Q96RI1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H4Q96RI1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H4Q96RI1 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NR1H4Q96RI1 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.05■□□□□ -0
NR1H4Q96RI1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.05■□□□□ -0
NR1H4Q96RI1 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR1H4Q96RI1 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.05■□□□□ -0
NR1H4Q96RI1 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR1H4Q96RI1 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H4Q96RI1 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.05■□□□□ -0
NR1H4Q96RI1 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NR1H4Q96RI1 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NR1H4Q96RI1 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.04■□□□□ -0
NR1H4Q96RI1 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H4Q96RI1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms