Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.49■□□□□ 0.23
IFT43Q96FT9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IFT43Q96FT9 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 MIR346-201ENST00000362234 95 ntBASIC16.48■□□□□ 0.23
IFT43Q96FT9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 KLF2P3-201ENST00000451977 1087 ntBASIC16.48■□□□□ 0.23
IFT43Q96FT9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 AJ011932.1-201ENST00000621707 465 ntBASIC16.48■□□□□ 0.23
IFT43Q96FT9 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
IFT43Q96FT9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.48■□□□□ 0.23
IFT43Q96FT9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
IFT43Q96FT9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
IFT43Q96FT9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IFT43Q96FT9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.46■□□□□ 0.23
IFT43Q96FT9 AC055876.3-201ENST00000431496 288 ntBASIC16.46■□□□□ 0.23
IFT43Q96FT9 AC026150.2-201ENST00000564693 1156 ntBASIC16.46■□□□□ 0.23
IFT43Q96FT9 AC140878.1-201ENST00000565277 250 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms