Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 AC090616.6-203ENST00000579186 1945 ntBASIC13.98□□□□□ -0.17
TMEM54Q969K7 AC087499.5-201ENST00000452760 1342 ntBASIC13.98□□□□□ -0.17
TMEM54Q969K7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 MIR943-201ENST00000401286 94 ntBASIC13.98□□□□□ -0.17
TMEM54Q969K7 AC074338.1-201ENST00000416825 156 ntBASIC13.98□□□□□ -0.17
TMEM54Q969K7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 RN7SL618P-201ENST00000477850 296 ntBASIC13.98□□□□□ -0.17
TMEM54Q969K7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 DUX4L27-201ENST00000554796 1261 ntBASIC13.98□□□□□ -0.17
TMEM54Q969K7 AC010336.2-201ENST00000564226 506 ntBASIC13.98□□□□□ -0.17
TMEM54Q969K7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
TMEM54Q969K7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM54Q969K7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 AC092183.1-201ENST00000469884 875 ntBASIC13.97□□□□□ -0.17
TMEM54Q969K7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TMEM54Q969K7 AC087481.3-201ENST00000602886 1894 ntBASIC13.97□□□□□ -0.17
TMEM54Q969K7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TMEM54Q969K7 AC100757.3-201ENST00000622361 1406 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms