Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.78■□□□□ 0.12
SCAMP4Q969E2 AC136604.1-201ENST00000418535 575 ntBASIC15.78■□□□□ 0.12
SCAMP4Q969E2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 SRD5A3P1-201ENST00000603021 949 ntBASIC15.78■□□□□ 0.12
SCAMP4Q969E2 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.78■□□□□ 0.12
SCAMP4Q969E2 AF228730.6-201ENST00000641497 218 ntBASIC15.78■□□□□ 0.12
SCAMP4Q969E2 AC084121.3-201ENST00000641716 218 ntBASIC15.78■□□□□ 0.12
SCAMP4Q969E2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.78■□□□□ 0.12
SCAMP4Q969E2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCAMP4Q969E2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 SPDYE19P-201ENST00000338590 713 ntBASIC15.77■□□□□ 0.12
SCAMP4Q969E2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 KRT18P64-201ENST00000434946 1219 ntBASIC15.77■□□□□ 0.12
SCAMP4Q969E2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 DOC2GP-202ENST00000514950 1163 ntBASIC15.77■□□□□ 0.12
SCAMP4Q969E2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 MIR4313-201ENST00000580760 101 ntBASIC15.77■□□□□ 0.12
SCAMP4Q969E2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.77■□□□□ 0.12
SCAMP4Q969E2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCAMP4Q969E2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.77■□□□□ 0.11
SCAMP4Q969E2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SCAMP4Q969E2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.77■□□□□ 0.11
SCAMP4Q969E2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.77■□□□□ 0.11
SCAMP4Q969E2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCAMP4Q969E2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCAMP4Q969E2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCAMP4Q969E2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SCAMP4Q969E2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SCAMP4Q969E2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SCAMP4Q969E2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.77■□□□□ 0.11
SCAMP4Q969E2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 AL365203.3-201ENST00000609742 2057 ntBASIC15.76■□□□□ 0.11
SCAMP4Q969E2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 RPL13P2-201ENST00000440687 659 ntBASIC15.76■□□□□ 0.11
SCAMP4Q969E2 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 AC004233.3-201ENST00000607794 1269 ntBASIC15.76■□□□□ 0.11
SCAMP4Q969E2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.76■□□□□ 0.11
SCAMP4Q969E2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms