Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.92■□□□□ 0.3
DDX1Q92499 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.92■□□□□ 0.3
DDX1Q92499 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.92■□□□□ 0.3
DDX1Q92499 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.92■□□□□ 0.3
DDX1Q92499 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
DDX1Q92499 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.92■□□□□ 0.3
DDX1Q92499 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.92■□□□□ 0.3
DDX1Q92499 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DDX1Q92499 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.91■□□□□ 0.3
DDX1Q92499 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.91■□□□□ 0.3
DDX1Q92499 AL035456.1-201ENST00000456064 1369 ntBASIC16.91■□□□□ 0.3
DDX1Q92499 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.91■□□□□ 0.3
DDX1Q92499 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.91■□□□□ 0.3
DDX1Q92499 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.91■□□□□ 0.3
DDX1Q92499 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.91■□□□□ 0.3
DDX1Q92499 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
DDX1Q92499 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 AC245100.3-201ENST00000441281 285 ntBASIC16.91■□□□□ 0.3
DDX1Q92499 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.91■□□□□ 0.3
DDX1Q92499 KRT17P7-201ENST00000451704 1104 ntBASIC16.91■□□□□ 0.3
DDX1Q92499 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.91■□□□□ 0.3
DDX1Q92499 IGHV3-42-201ENST00000520410 361 ntBASIC16.91■□□□□ 0.3
DDX1Q92499 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.91■□□□□ 0.3
DDX1Q92499 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.91■□□□□ 0.3
DDX1Q92499 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.91■□□□□ 0.3
DDX1Q92499 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
DDX1Q92499 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
DDX1Q92499 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX1Q92499 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
DDX1Q92499 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
DDX1Q92499 KRT8P12-202ENST00000472924 1397 ntBASIC16.9■□□□□ 0.3
DDX1Q92499 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX1Q92499 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
DDX1Q92499 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX1Q92499 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.9■□□□□ 0.3
DDX1Q92499 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.9■□□□□ 0.3
DDX1Q92499 AL607033.1-201ENST00000623900 1599 ntBASIC16.9■□□□□ 0.3
DDX1Q92499 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
DDX1Q92499 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX1Q92499 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
DDX1Q92499 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX1Q92499 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX1Q92499 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX1Q92499 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
DDX1Q92499 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX1Q92499 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.9■□□□□ 0.3
DDX1Q92499 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.9■□□□□ 0.3
DDX1Q92499 PIN1P1-201ENST00000412108 996 ntBASIC16.9■□□□□ 0.3
DDX1Q92499 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.9■□□□□ 0.3
DDX1Q92499 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.9■□□□□ 0.3
DDX1Q92499 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.9■□□□□ 0.3
DDX1Q92499 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.9■□□□□ 0.3
DDX1Q92499 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.9■□□□□ 0.3
DDX1Q92499 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.9■□□□□ 0.3
DDX1Q92499 MIR6080-201ENST00000617359 66 ntBASIC16.9■□□□□ 0.3
DDX1Q92499 MIR6799-201ENST00000620297 69 ntBASIC16.9■□□□□ 0.3
DDX1Q92499 AC025048.6-201ENST00000634326 1161 ntBASIC16.9■□□□□ 0.3
DDX1Q92499 AC127383.1-201ENST00000444697 1800 ntBASIC16.9■□□□□ 0.3
DDX1Q92499 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.9■□□□□ 0.3
DDX1Q92499 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.9■□□□□ 0.3
DDX1Q92499 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX1Q92499 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX1Q92499 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.9■□□□□ 0.3
DDX1Q92499 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.9■□□□□ 0.3
DDX1Q92499 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX1Q92499 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
DDX1Q92499 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
DDX1Q92499 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.9■□□□□ 0.3
DDX1Q92499 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
DDX1Q92499 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DDX1Q92499 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
DDX1Q92499 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DDX1Q92499 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
DDX1Q92499 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
DDX1Q92499 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.89■□□□□ 0.3
DDX1Q92499 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms