Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRFBP1Q8NEF9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 MTND6P24-201ENST00000440466 518 ntBASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 AL450472.2-201ENST00000603663 1156 ntBASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 GPALPP1-207ENST00000611650 899 ntBASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 AC006538.3-201ENST00000612495 578 ntBASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRFBP1Q8NEF9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 CETN4P-206ENST00000642099 2168 ntBASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 AC007326.2-201ENST00000624224 7579 ntBASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRFBP1Q8NEF9 PHKG1P2-201ENST00000457537 863 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms