Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.3■□□□□ 0.2
SIX5Q8N196 IGHJ2P-201ENST00000454480 60 ntBASIC16.3■□□□□ 0.2
SIX5Q8N196 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.3■□□□□ 0.2
SIX5Q8N196 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.3■□□□□ 0.2
SIX5Q8N196 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.3■□□□□ 0.2
SIX5Q8N196 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.3■□□□□ 0.2
SIX5Q8N196 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.3■□□□□ 0.2
SIX5Q8N196 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 AC124283.3-201ENST00000570869 594 ntBASIC16.3■□□□□ 0.2
SIX5Q8N196 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.3■□□□□ 0.2
SIX5Q8N196 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.3■□□□□ 0.2
SIX5Q8N196 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.3■□□□□ 0.2
SIX5Q8N196 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
SIX5Q8N196 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SIX5Q8N196 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
SIX5Q8N196 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SIX5Q8N196 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SIX5Q8N196 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.3■□□□□ 0.2
SIX5Q8N196 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SIX5Q8N196 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SIX5Q8N196 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.29■□□□□ 0.2
SIX5Q8N196 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.29■□□□□ 0.2
SIX5Q8N196 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.29■□□□□ 0.2
SIX5Q8N196 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 AC134312.5-201ENST00000568031 1313 ntBASIC16.29■□□□□ 0.2
SIX5Q8N196 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.29■□□□□ 0.2
SIX5Q8N196 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.29■□□□□ 0.2
SIX5Q8N196 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.29■□□□□ 0.2
SIX5Q8N196 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.29■□□□□ 0.2
SIX5Q8N196 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.29■□□□□ 0.2
SIX5Q8N196 RPL13AP25-201ENST00000484130 612 ntBASIC16.29■□□□□ 0.2
SIX5Q8N196 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.29■□□□□ 0.2
SIX5Q8N196 AP002490.2-201ENST00000524791 560 ntBASIC16.29■□□□□ 0.2
SIX5Q8N196 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.29■□□□□ 0.2
SIX5Q8N196 AP001258.2-201ENST00000529891 490 ntBASIC16.29■□□□□ 0.2
SIX5Q8N196 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.29■□□□□ 0.2
SIX5Q8N196 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.29■□□□□ 0.2
SIX5Q8N196 MIR4321-201ENST00000592276 80 ntBASIC16.29■□□□□ 0.2
SIX5Q8N196 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SIX5Q8N196 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SIX5Q8N196 AL022328.3-201ENST00000607943 679 ntBASIC16.29■□□□□ 0.2
SIX5Q8N196 AC244669.2-201ENST00000612320 853 ntBASIC16.29■□□□□ 0.2
SIX5Q8N196 AL021578.1-201ENST00000613646 709 ntBASIC16.29■□□□□ 0.2
SIX5Q8N196 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.29■□□□□ 0.2
SIX5Q8N196 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.29■□□□□ 0.2
SIX5Q8N196 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SIX5Q8N196 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SIX5Q8N196 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.29■□□□□ 0.2
SIX5Q8N196 TSPY26P-202ENST00000565928 3884 ntBASIC16.29■□□□□ 0.2
SIX5Q8N196 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 U82695.1-201ENST00000635752 1889 ntBASIC16.29■□□□□ 0.2
SIX5Q8N196 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
SIX5Q8N196 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SIX5Q8N196 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX5Q8N196 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SIX5Q8N196 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX5Q8N196 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.28■□□□□ 0.2
SIX5Q8N196 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX5Q8N196 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SIX5Q8N196 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SIX5Q8N196 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SIX5Q8N196 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.28■□□□□ 0.2
SIX5Q8N196 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SIX5Q8N196 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.28■□□□□ 0.2
SIX5Q8N196 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms