Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 PMS2P4-201ENST00000412466 1052 ntBASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 SCARNA2-201ENST00000458748 420 ntBASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM42Q8IWZ5 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 CICP24-201ENST00000605464 2705 ntBASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 RNU1-129P-201ENST00000384064 167 ntBASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 LAGE3P1-201ENST00000425356 484 ntBASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 AC093724.1-201ENST00000448659 1027 ntBASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 U1.21-201ENST00000580816 167 ntBASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 MIR4515-201ENST00000584082 81 ntBASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM42Q8IWZ5 AC067750.1-201ENST00000608826 6545 ntBASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 AC009078.2-202ENST00000463353 338 ntBASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 AP002469.2-201ENST00000531724 424 ntBASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 SART3-203ENST00000546611 1184 ntBASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 AL031055.1-201ENST00000606362 631 ntBASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 AC112693.3-201ENST00000624819 1983 ntBASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
TRIM42Q8IWZ5 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms