Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CSMD3Q7Z407 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 AL354877.1-201ENST00000424412 413 ntBASIC10.86□□□□□ -0.67
CSMD3Q7Z407 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 AC073352.2-201ENST00000609385 439 ntBASIC10.86□□□□□ -0.67
CSMD3Q7Z407 AL136301.1-201ENST00000615830 422 ntBASIC10.86□□□□□ -0.67
CSMD3Q7Z407 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 TUBBP5-203ENST00000508529 1334 ntBASIC10.86□□□□□ -0.67
CSMD3Q7Z407 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 AC004899.1-201ENST00000424687 1714 ntBASIC10.86□□□□□ -0.67
CSMD3Q7Z407 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 MIR769-201ENST00000390225 118 ntBASIC10.86□□□□□ -0.67
CSMD3Q7Z407 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 AC141586.1-203ENST00000567242 366 ntBASIC10.86□□□□□ -0.67
CSMD3Q7Z407 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 CASP16P-204ENST00000635032 809 ntBASIC10.86□□□□□ -0.67
CSMD3Q7Z407 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 WAC-202ENST00000347934 2839 ntTSL 5 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 AC244452.3-201ENST00000636814 210 ntBASIC10.86□□□□□ -0.67
CSMD3Q7Z407 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC10.86□□□□□ -0.67
CSMD3Q7Z407 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CSMD3Q7Z407 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 RAC2-202ENST00000401529 569 ntTSL 4 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC10.85□□□□□ -0.67
CSMD3Q7Z407 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms