Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 LINC02228-204ENST00000642115 2962 ntBASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 AC007326.2-201ENST00000624224 7579 ntBASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 PAUPAR-201ENST00000630360 2965 ntBASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 AL627223.1-201ENST00000416693 442 ntBASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 UPF3AP3-201ENST00000420996 769 ntBASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 BX842568.4-201ENST00000421222 227 ntBASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 FAM58DP-201ENST00000428076 619 ntBASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 AC005237.2-201ENST00000434368 219 ntBASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 ALG1L8P-201ENST00000533887 760 ntBASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 MIR3687-2-201ENST00000577708 61 ntBASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 AC026979.3-201ENST00000607315 403 ntBASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 MIR3687-1-201ENST00000614492 61 ntBASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HIST2H3AQ71DI3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST2H3AQ71DI3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.02□□□□□ -0.16
HIST2H3AQ71DI3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST2H3AQ71DI3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.02□□□□□ -0.16
HIST2H3AQ71DI3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.02□□□□□ -0.16
HIST2H3AQ71DI3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST2H3AQ71DI3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.02□□□□□ -0.16
HIST2H3AQ71DI3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST2H3AQ71DI3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
HIST2H3AQ71DI3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HIST2H3AQ71DI3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST2H3AQ71DI3 CYP4F24P-201ENST00000586049 1580 ntBASIC14.02□□□□□ -0.16
HIST2H3AQ71DI3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HIST2H3AQ71DI3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms