Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP31Q70CQ4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP31Q70CQ4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP31Q70CQ4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP31Q70CQ4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP31Q70CQ4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP31Q70CQ4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP31Q70CQ4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
USP31Q70CQ4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP31Q70CQ4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP31Q70CQ4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
USP31Q70CQ4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP31Q70CQ4 NUS1P3-201ENST00000423502 862 ntBASIC20.93■□□□□ 0.94
USP31Q70CQ4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC20.93■□□□□ 0.94
USP31Q70CQ4 KRT8P13-201ENST00000463294 1010 ntBASIC20.93■□□□□ 0.94
USP31Q70CQ4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.93■□□□□ 0.94
USP31Q70CQ4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.93■□□□□ 0.94
USP31Q70CQ4 AL645728.2-202ENST00000641679 227 ntBASIC20.93■□□□□ 0.94
USP31Q70CQ4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
USP31Q70CQ4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP31Q70CQ4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP31Q70CQ4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP31Q70CQ4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP31Q70CQ4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP31Q70CQ4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP31Q70CQ4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP31Q70CQ4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP31Q70CQ4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP31Q70CQ4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP31Q70CQ4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP31Q70CQ4 MIR1202-201ENST00000408529 83 ntBASIC20.92■□□□□ 0.94
USP31Q70CQ4 AC007969.1-201ENST00000433675 447 ntBASIC20.92■□□□□ 0.94
USP31Q70CQ4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 EEF1DP1-201ENST00000585891 896 ntBASIC20.92■□□□□ 0.94
USP31Q70CQ4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP31Q70CQ4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.92■□□□□ 0.94
USP31Q70CQ4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP31Q70CQ4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
USP31Q70CQ4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.91■□□□□ 0.94
USP31Q70CQ4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
USP31Q70CQ4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.91■□□□□ 0.94
USP31Q70CQ4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 AGER-203ENST00000375065 665 ntTSL 2 BASIC20.91■□□□□ 0.94
USP31Q70CQ4 AL139094.1-201ENST00000405549 1188 ntBASIC20.91■□□□□ 0.94
USP31Q70CQ4 CNN2P10-201ENST00000443067 918 ntBASIC20.91■□□□□ 0.94
USP31Q70CQ4 RPSAP36-202ENST00000494591 1261 ntBASIC20.91■□□□□ 0.94
USP31Q70CQ4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC20.91■□□□□ 0.94
USP31Q70CQ4 ECM1P1-201ENST00000604092 1279 ntBASIC20.91■□□□□ 0.94
USP31Q70CQ4 AL008638.5-201ENST00000623814 1298 ntBASIC20.91■□□□□ 0.94
USP31Q70CQ4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP31Q70CQ4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.91■□□□□ 0.94
USP31Q70CQ4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP31Q70CQ4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP31Q70CQ4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP31Q70CQ4 AL645937.2-201ENST00000396808 931 ntBASIC20.9■□□□□ 0.94
USP31Q70CQ4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 AL118558.3-201ENST00000607414 1079 ntBASIC20.9■□□□□ 0.94
USP31Q70CQ4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP31Q70CQ4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC20.9■□□□□ 0.94
USP31Q70CQ4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms