Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RFX4Q33E94 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RFX4Q33E94 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RFX4Q33E94 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.88□□□□□ -0.03
RFX4Q33E94 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.88□□□□□ -0.03
RFX4Q33E94 AGAP7P-201ENST00000582299 2062 ntBASIC14.88□□□□□ -0.03
RFX4Q33E94 AGAP14-201ENST00000624701 2060 ntBASIC14.88□□□□□ -0.03
RFX4Q33E94 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.87□□□□□ -0.03
RFX4Q33E94 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.87□□□□□ -0.03
RFX4Q33E94 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RFX4Q33E94 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.87□□□□□ -0.03
RFX4Q33E94 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.87□□□□□ -0.03
RFX4Q33E94 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.87□□□□□ -0.03
RFX4Q33E94 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.87□□□□□ -0.03
RFX4Q33E94 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RFX4Q33E94 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RFX4Q33E94 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
RFX4Q33E94 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.87□□□□□ -0.03
RFX4Q33E94 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.87□□□□□ -0.03
RFX4Q33E94 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.87□□□□□ -0.03
RFX4Q33E94 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.87□□□□□ -0.03
RFX4Q33E94 MIR4515-201ENST00000584082 81 ntBASIC14.87□□□□□ -0.03
RFX4Q33E94 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RFX4Q33E94 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.87□□□□□ -0.03
RFX4Q33E94 IFNL4P1-201ENST00000607083 540 ntBASIC14.87□□□□□ -0.03
RFX4Q33E94 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.87□□□□□ -0.03
RFX4Q33E94 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RFX4Q33E94 AC005593.1-201ENST00000624894 515 ntBASIC14.87□□□□□ -0.03
RFX4Q33E94 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RFX4Q33E94 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RFX4Q33E94 AP001282.1-201ENST00000531301 1499 ntBASIC14.87□□□□□ -0.03
RFX4Q33E94 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.87□□□□□ -0.03
RFX4Q33E94 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RFX4Q33E94 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RFX4Q33E94 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.86□□□□□ -0.03
RFX4Q33E94 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
RFX4Q33E94 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.86□□□□□ -0.03
RFX4Q33E94 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RFX4Q33E94 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RFX4Q33E94 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.86□□□□□ -0.03
RFX4Q33E94 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.86□□□□□ -0.03
RFX4Q33E94 FAM185BP-201ENST00000443595 716 ntBASIC14.86□□□□□ -0.03
RFX4Q33E94 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.86□□□□□ -0.03
RFX4Q33E94 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.86□□□□□ -0.03
RFX4Q33E94 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 OR7E47P-204ENST00000575924 449 ntBASIC14.86□□□□□ -0.03
RFX4Q33E94 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.86□□□□□ -0.03
RFX4Q33E94 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 AC021097.1-201ENST00000607902 574 ntBASIC14.86□□□□□ -0.03
RFX4Q33E94 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RFX4Q33E94 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
RFX4Q33E94 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.86□□□□□ -0.03
RFX4Q33E94 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.86□□□□□ -0.03
RFX4Q33E94 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFX4Q33E94 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms