Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC132872.4-202ENST00000622924 2756 ntBASIC14.42□□□□□ -0.1
FOXF1Q12946 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXF1Q12946 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
FOXF1Q12946 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXF1Q12946 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXF1Q12946 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXF1Q12946 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXF1Q12946 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
FOXF1Q12946 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
FOXF1Q12946 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXF1Q12946 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXF1Q12946 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXF1Q12946 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXF1Q12946 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXF1Q12946 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXF1Q12946 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXF1Q12946 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF1Q12946 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF1Q12946 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXF1Q12946 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
FOXF1Q12946 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF1Q12946 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF1Q12946 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXF1Q12946 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXF1Q12946 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 AC241585.1-201ENST00000433527 519 ntBASIC14.41□□□□□ -0.1
FOXF1Q12946 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXF1Q12946 AC093214.1-201ENST00000511688 1107 ntBASIC14.41□□□□□ -0.1
FOXF1Q12946 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 AC010336.2-201ENST00000564226 506 ntBASIC14.41□□□□□ -0.1
FOXF1Q12946 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXF1Q12946 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
FOXF1Q12946 AL590560.3-201ENST00000623350 461 ntBASIC14.41□□□□□ -0.1
FOXF1Q12946 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF1Q12946 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXF1Q12946 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF1Q12946 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF1Q12946 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF1Q12946 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF1Q12946 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
FOXF1Q12946 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF1Q12946 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
FOXF1Q12946 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF1Q12946 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXF1Q12946 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXF1Q12946 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXF1Q12946 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXF1Q12946 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
FOXF1Q12946 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
FOXF1Q12946 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
FOXF1Q12946 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF1Q12946 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF1Q12946 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FOXF1Q12946 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF1Q12946 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF1Q12946 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
FOXF1Q12946 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXF1Q12946 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF1Q12946 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXF1Q12946 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF1Q12946 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF1Q12946 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXF1Q12946 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF1Q12946 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXF1Q12946 AL844908.2-201ENST00000609461 460 ntBASIC14.4□□□□□ -0.1
FOXF1Q12946 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXF1Q12946 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.4□□□□□ -0.1
FOXF1Q12946 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXF1Q12946 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms