Protein–RNA interactions for Protein: Q0P6D6

CCDC15, Coiled-coil domain-containing protein 15, humanhuman

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC15Q0P6D6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC15Q0P6D6 AC073439.1-201ENST00000624121 1774 ntBASIC16.56■□□□□ 0.24
CCDC15Q0P6D6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC15Q0P6D6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC15Q0P6D6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC15Q0P6D6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC15Q0P6D6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCDC15Q0P6D6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC15Q0P6D6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC15Q0P6D6 AC008677.1-201ENST00000519230 1561 ntBASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 FAM8A3P-201ENST00000427218 844 ntBASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 AL353705.2-201ENST00000428243 662 ntBASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 AC055876.3-201ENST00000431496 288 ntBASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 MIR3197-201ENST00000582241 73 ntBASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 AL158211.3-201ENST00000607385 239 ntBASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 AC138649.4-201ENST00000612222 287 ntBASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC15Q0P6D6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 AL035456.1-201ENST00000456064 1369 ntBASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 FAM220BP-201ENST00000377689 816 ntBASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 SPCS2P1-201ENST00000561636 679 ntBASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 AC024267.1-201ENST00000582320 895 ntBASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 AP3S2-216ENST00000617003 1561 ntBASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC15Q0P6D6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC15Q0P6D6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC15Q0P6D6 GGT3P-204ENST00000453783 1664 ntBASIC16.53■□□□□ 0.24
CCDC15Q0P6D6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms